Gene Pisl_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1846 
Symbol 
ID4616400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1674050 
End bp1675264 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content58% 
IMG OID639784930 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_931337 
Protein GI119873330 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0996906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGCAA TAGAAGGAGG TAAACCAGTG CGGGAAAAGC CTATCGTGGC TAGGCCTGTC 
GTGTACAGTG AGGACGTCCT CCACGACATA GCAGAAGTTC TCAAATCTGG AATTCTAACT
GCACAACACG GCAAGTGGGT AAAAGCCTTT GAGACAGAGC TCGCCGCCTA CCTCGGCGTG
AGATACGCCG TGGCAGTCTC CAACGGCACT ACAGCCCTCC ACACGGCGCT TAAGGCCATA
GGCGTGGGGC CAGGCGACGA GGTGGTGACA ACCCCCTTCA CCTTCGCAGC CACCGCCACC
GCCATACTCC ACTCCAACGC CGTGCCGGTC TTTGCAGACA TAGACAGAGA AACTCTCAAC
CTAGACCCAG CCTCTGTCGA AGAGAAAATA ACAGAGAGGA CAAAAGCCGT GGTGGTGGTG
CACCTAGCCG GCATGCCAGC CGAGATGGAC CAGTTCATGA AGCTGGCAGA GAGATACGGC
GTGAAGATTA TAGAAGATAC GGCACAAGCC CTCGGCGCAG AGTACCGGGG GAAGAGAGTC
GGCTCGATAG GCCACATGTC CACCTTCAGC CTATACGCCA CAAAGCACAT CACCTCCGGC
GAGGGAGGCG CCGTCGCCAC AGACGTCGCC GCCTACGCGG AGAGGGCAAG GCTAATTAGA
GCACACGGCG AGGTGGGGAA GTATAGCTAC GAGCTCCTCG GCTATAACTA CAGGATGACC
GAGATACAGG GCGTACTCGC CTACCACCAG CTCAAACAGC TGCCAGAGAT GCAGAAGAGA
CGCGAGGCCT ATGTAAAGAC GCTGTTGGAG GAGCTGGCCC CCCTAGAGGG CGACCTCCTC
ACCATCCCAA AGCCAAGGCC CTACGTCAGA CACGCCTGGC ACCTCGTCCA GATACTACTC
GCCGTGGAGA AGCTAAACAA ACCCCGCGAC TATGTAGTAG AGGCGCTGAG GGCAGAAGGC
GTGGGAAACG CCTTCGTCAC CTACCCAACC CCCCTCTACA AGACGCCCCT CTTCCAACGC
AGAGAAGGCC ACGGCCTCGG CTGCCCGTGG ACTTGTCCAT ACCAGAGGCG CAGGGTGGAG
TACAAGCCCC TCCCAAACGC CGAGTGGGCC GCGGAGCGCG TCGTCTCGCT ATTAGTAATG
CCCAATTTAA CAGAACAAGA CGCGGTAGAC ACAGCGACAG CAGTGAAAAA AGTGCTAACC
GCCCTCAGAA GGTAG
 
Protein sequence
MLAIEGGKPV REKPIVARPV VYSEDVLHDI AEVLKSGILT AQHGKWVKAF ETELAAYLGV 
RYAVAVSNGT TALHTALKAI GVGPGDEVVT TPFTFAATAT AILHSNAVPV FADIDRETLN
LDPASVEEKI TERTKAVVVV HLAGMPAEMD QFMKLAERYG VKIIEDTAQA LGAEYRGKRV
GSIGHMSTFS LYATKHITSG EGGAVATDVA AYAERARLIR AHGEVGKYSY ELLGYNYRMT
EIQGVLAYHQ LKQLPEMQKR REAYVKTLLE ELAPLEGDLL TIPKPRPYVR HAWHLVQILL
AVEKLNKPRD YVVEALRAEG VGNAFVTYPT PLYKTPLFQR REGHGLGCPW TCPYQRRRVE
YKPLPNAEWA AERVVSLLVM PNLTEQDAVD TATAVKKVLT ALRR