Gene Pisl_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1835 
Symbol 
ID4616569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1664904 
End bp1665203 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content52% 
IMG OID639784918 
Producthypothetical protein 
Protein accessionYP_931326 
Protein GI119873319 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000551501 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCATTGC TCTTCGGCCA TGGGGAAATA GTCAAAACAT GGCGTTGGCT TAAAAACGTG 
TTAGAGAGCC CCACAGCCTT TAGGCTAGAC CCCGAGGAGC TCTACAGAGC TCTTACAGAG
GCTGAAGAAA AGGGGCTCTC CCTCTTGGCC ATATTTCACA CACATCCAGG ACCCCCCACG
CCAAGTCCCA TAGACCTCCG CTATATGAAA ATCTGGCGGG TGGTCTGGGT CATATCTAAT
GTATACACGT GGGAGACAGC CGCCTGGAGG TTAGACGAGA GAGGTTTAGT AAAGGTATGA
 
Protein sequence
MALLFGHGEI VKTWRWLKNV LESPTAFRLD PEELYRALTE AEEKGLSLLA IFHTHPGPPT 
PSPIDLRYMK IWRVVWVISN VYTWETAAWR LDERGLVKV