Gene Pisl_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1833 
Symbol 
ID4617223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1663975 
End bp1664433 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content47% 
IMG OID639784916 
Productriboflavin synthase 
Protein accessionYP_931324 
Protein GI119873317 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1731] Archaeal riboflavin synthase 
TIGRFAM ID[TIGR01506] riboflavin synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000113507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGTTGCA TAGGCGTTGT AGATACCACC TTTGCAAGAG TAGATATGGG AAGCGTCGCC 
GTGGAGGAGT TAAAAAATCT GCTTCCACAC GCCGTTGTAA AAAGAATTAC TGTACCTGGG
ATAAAAAACA CCGTGTGGGG CGCCTTGCGT CTCATAAAGG ATGGATGCGA TGCAGTTATT
GTACTAGGTT GGGTCGGCCC CACGCAGGTG GATAAATATA GCTACTTAGC CACATCTATT
GGACTTATCC AACTTCAGAT AGCCACAGGC GCCCTTGTAT TAGACGTCAC TGTACATGAA
GAAGAGGGCG GCGGCGACGA GAAAAAACTA AAAGAGATAG CTATAGATAG GGCGAGAAAA
CACGCGTGGA ATCTAGCCCA GCTATTGACA GAGGGACTTG AGAAATACGC TGGCAAAGGC
TTAAGACAAG GATATCCACA CGCCGGCGAA ATTCTATAA
 
Protein sequence
MSCIGVVDTT FARVDMGSVA VEELKNLLPH AVVKRITVPG IKNTVWGALR LIKDGCDAVI 
VLGWVGPTQV DKYSYLATSI GLIQLQIATG ALVLDVTVHE EEGGGDEKKL KEIAIDRARK
HAWNLAQLLT EGLEKYAGKG LRQGYPHAGE IL