| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1820 |
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| Symbol | |
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| ID | 4616384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1654290 |
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| End bp | 1654979 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639784903 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_931311 |
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| Protein GI | 119873304 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.164936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000000016606 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTTAG AACACTATAT AGAGGCCCTA GCCTATGTGG TGGGGGGTGT GCCCACTACG
CTTTCTCTGG CGTTGCTCTC TTTTGTCATA GGGCTCGTCC TCGGCTCTAT ACTCCTTCTT
ATTAGATTCT TCTTGCCCAA GCCTCTTCCA TGGCTTGCAT CAGCTTACGT CGAGGCGTTT
AGAGGTACGC CGCTTCTCGT TCAAATTTTC ATTATATATT TCGGCGTGGG AGGTTATCTA
AAAGACTACG GCATAAATAT AGACCCCTTT ACAGCCGGCG TAATTGCCCT CGGCTTAAAT
AGCGCGGCGT ATCAAGCCGA GATCTTCCGC TCGGCTGTTC AAGCCATACC GCTGGAGCAG
TATCTAACTG CAGAGGCATA CGCGTTTACA AAAACTCAGA CTTTCCGCTA TATTATACTC
CCCCAGGCGC TTAGGATAGC AATTCCAGCG CTTATGAACG AGCTTGTGTT GTTGATTAAA
GATTCTTCTC TTGTAGCTGT CATTGGCGTT ACGCCGCCAG ATATATTTAG AAGAGCTGAT
TACTACGCCG CCTCTAAATT TGCTTATTTC GAGGCTTATT TAGCCGCTGC AACGATATAT
TTCATAATTT GTTACACTAT GGTGAAGATA AGTCATTATA TCGAGCGTAA GTATGCAATA
CCTGGGTATT TAAGAAGAGG CATAATATAG
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| Protein sequence | MALEHYIEAL AYVVGGVPTT LSLALLSFVI GLVLGSILLL IRFFLPKPLP WLASAYVEAF
RGTPLLVQIF IIYFGVGGYL KDYGINIDPF TAGVIALGLN SAAYQAEIFR SAVQAIPLEQ
YLTAEAYAFT KTQTFRYIIL PQALRIAIPA LMNELVLLIK DSSLVAVIGV TPPDIFRRAD
YYAASKFAYF EAYLAAATIY FIICYTMVKI SHYIERKYAI PGYLRRGII
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