| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1816 |
|---|
| Symbol | |
|---|
| ID | 4616847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1651171 |
|---|
| End bp | 1652436 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639784900 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase, C terminal |
|---|
| Protein accession | YP_931308 |
|---|
| Protein GI | 119873301 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.000000608634 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGGA CAGGGTTTTT AGAGTATGTG CTTAACTATG TAAAAAAAGG CGTAGAATTA
GGCGGATTTC CCGAAGATTT CTATAAAATC TTGTCTAGGC CTAGGCGTGT TTTGATTGTT
AATATTCCTG TGAGGTTGGA TGGTGGTGGT TTTGAGGTGT TTGAGGGTTA TCGTGTGCAG
CATTGTGATG TTCTCGGCCC GTATAAGGGT GGGGTTCGTT TTCATCCTGA GGTTACTCTT
GCCGACGACG TCGCCTTGGC TATTTTAATG ACGTTGAAAA ATAGCCTAGC TGGCTTGCCG
TATGGCGGCG CTAAAGGCGC AGTACGTGTA GACCCTAAGA AACTCTCGCA GAGAGAACTT
GAAGAGCTCT CTAGAGGATA TGCCAGAGCC ATAGCCCCCC TCATAGGCGA CGTAGTCGAC
ATCCCAGCGC CTGACGTTGG GACAAACGCC CAAATCATGG CGTGGATGGT AGACGAATAT
TCAAAAATAA AGGGCTACAA CGTGCCCGGG GTATTCACCT CAAAACCACC AGAGCTATGG
GGAAACCCAG TGAGAGAATA CGCCACAGGC TTTGGAGTAG CAGTAGCGAC AAGAGAAATG
GCAAAAAAAC TATGGGGCGG AATAGAAGGA AAAACAGTAG CGATACAGGG TATGGGTAAT
GTGGGGAGGT GGACAGCGTA TTGGCTAGAA AAAATGGGCG CTAAGGTGAT AGCTGTGTCT
GATATAAATG GCGTAGCTTA TAGAAAGGAG GGACTTAATG TTGAATTGAT ACAAAAAAAC
AAGGGACTTA CAGGGCCTGC TCTCGTAGAA CTGTTTACGA CAAAAGACAA TGCCGAATTT
GTTAAAAACC CAGATGCCAT ATTTAAACTA GACGTCGACA TTTTCGTCCC CGCCGCTATT
GAGAATGTCA TTAGGGGTGA TAATGCTGGG CTTGTGAAGG CTAGGCTTGT TGTTGAGGGT
GCTAATGGCC CTACTACTCC TGAGGCTGAG AGGATTTTGT ATGAGAGGGG GGTTGTCGTA
GTTCCTGATA TCCTCGCCAA CGCCGGCGGC GTGATTATGT CGTATTTAGA GTGGGTGGAG
AATCTCCAGT GGTATATCTG GGACGAGGAG GAGACTAGAA AGAGACTTGA AAACATAATG
GTAAACAACG TCGAGAGAGT ATACAAGAGA TGGCAGAGAG AAAAAGGATG GACAATGAGA
GACGCAGCAA TAGTAACCGC ATTAGAAAGA ATATACAACG CCATGAAAAT AAGAGGGTGG
ATCTAA
|
|---|
| Protein sequence | MERTGFLEYV LNYVKKGVEL GGFPEDFYKI LSRPRRVLIV NIPVRLDGGG FEVFEGYRVQ
HCDVLGPYKG GVRFHPEVTL ADDVALAILM TLKNSLAGLP YGGAKGAVRV DPKKLSQREL
EELSRGYARA IAPLIGDVVD IPAPDVGTNA QIMAWMVDEY SKIKGYNVPG VFTSKPPELW
GNPVREYATG FGVAVATREM AKKLWGGIEG KTVAIQGMGN VGRWTAYWLE KMGAKVIAVS
DINGVAYRKE GLNVELIQKN KGLTGPALVE LFTTKDNAEF VKNPDAIFKL DVDIFVPAAI
ENVIRGDNAG LVKARLVVEG ANGPTTPEAE RILYERGVVV VPDILANAGG VIMSYLEWVE
NLQWYIWDEE ETRKRLENIM VNNVERVYKR WQREKGWTMR DAAIVTALER IYNAMKIRGW
I
|
|---|
| |