| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1814 |
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| Symbol | aksA |
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| ID | 4617668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1648950 |
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| End bp | 1650170 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639784898 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_931306 |
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| Protein GI | 119873299 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases
[TIGR02660] homocitrate synthase NifV |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.770908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00000383108 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATTATC ACGACGGGCG GTTATATATA ATACACAAAG CTTATATAGG TGTAGATTTT
AGAGCTTATG GCTTCGGGGC TCGTGTAATT AAAATCTTTG ATACTACTCT GCGCGATGGT
GAACAAATGC CTGGCGTCGC TCTGTCTAAT GAAGAAAAAT TACAGATCGC CCTAGCTCTA
GACGAAGCTG GCGTAGATAT GATAGAGGCC GGGTTTGCGG CTGTGTCAAA AGACGAGCAG
ATAGCCATTA GGCAGATCGC AAAAGAGGTC TATAGAGCCG ATGTTGTTAG CTTAGCTAGA
ATGTCGAAAT CTGACGTAGA TGCGGCAGTA TCAGCTGATG TAGATATGGT ACATGTATTT
ATAGCGACAT CAGATATACA TTTAAAATAT AAACTTGGCA TATCAAGAGA GGAGGCTCTA
CGTAGAGTAG AGGAGGTTGT ATCTTATGCA AAATCATATG GTGTGAAAGT TTTATTCAGC
GCTGAGGATG CCACTAGAAG CGACCTAGAG TTTTTAGCTA GAGTATATAA GACAGCTATT
GAAGCAGGCG CAGACGAGAT AAACGTCCCA GATACAGTTG GCATAATGAC GCCAAGCCGT
ATGGCATATT TAATACGTTT CCTCAGGGAG AGACTTCCCC CGGTGCCTAT GCATATACAT
TGTCACGACG ACTTTGGCAT GGCTGTTGCA AATACAATTA CGGCGATAGA AAACGGTGCT
GACGTAGCTC AAGTCGTTGT TAATAACTTT GGCGAAAGAG CCGGTAATGC GGCTTTAGAA
GAGGTCGTGG CGGCGTTACA TTTTCTACTT GGCATGAGGA CAAATGTAAA ACTGGAAAAG
CTCTACGAGC TTTCTCAGCT AGTTTCAAAA CTATTTGGCG TGCCAGTGCC TCCAAACAAA
GCTGTTGTTG GGGAAAACGC CTTTAGCCAC GAGGCGGGTA TACATGTACA CGGCGTGTTA
AACAACCCGT TTACATACGA GCCGATGAGA CCCGAAGACG TTGGAAACAA GAGGAGGATT
GTTTTAGGTA AACACTCTGG GAGACATGCA GTTGAGTGGG CATTGAAAAA CATGGGGATT
AACCCAAGTG AAGACTTAGT GGAGTACGTC CTCAACACAG TAAAGGAGCT TGCAGTTAAA
AAGGTGAAAA TTGACGAGAG TATACTTAAA GAAATTGTCA CTACTTATAT AACTGCAAAA
TCCAGGAGAT ATGCCATATA A
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| Protein sequence | MHYHDGRLYI IHKAYIGVDF RAYGFGARVI KIFDTTLRDG EQMPGVALSN EEKLQIALAL
DEAGVDMIEA GFAAVSKDEQ IAIRQIAKEV YRADVVSLAR MSKSDVDAAV SADVDMVHVF
IATSDIHLKY KLGISREEAL RRVEEVVSYA KSYGVKVLFS AEDATRSDLE FLARVYKTAI
EAGADEINVP DTVGIMTPSR MAYLIRFLRE RLPPVPMHIH CHDDFGMAVA NTITAIENGA
DVAQVVVNNF GERAGNAALE EVVAALHFLL GMRTNVKLEK LYELSQLVSK LFGVPVPPNK
AVVGENAFSH EAGIHVHGVL NNPFTYEPMR PEDVGNKRRI VLGKHSGRHA VEWALKNMGI
NPSEDLVEYV LNTVKELAVK KVKIDESILK EIVTTYITAK SRRYAI
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