Gene Pisl_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1803 
Symbol 
ID4617695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1635792 
End bp1636457 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content47% 
IMG OID639784887 
Productribosome biogenesis protein 
Protein accessionYP_931295 
Protein GI119873288 
COG category[S] Function unknown 
COG ID[COG1756] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.022092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.296556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTCG TATTAGCCGA ATCTGCGCTT GAGCTTGTGC CTCGGGAGCT CTGGAACCAC 
CCAGTTATAC AAGCAGACGC CAAGAGGAGA GGCAAAAAGC CGGGGGAGAT TCTTCTAGAT
AGAGCGCGAC ATCATTTAGC TATGTCGTCG CTAAGAGATG CGTCTAAGAG AGGTAGGCCA
GATATCGTAC ATCAAGTGCT TTTGGTGTTT CAATACAGTT TGCTAAACAA AAGGGGCCTT
GGGAGAATAT ACATACACAC CCAGGGAGAT TATACAATAT ATGTGCGTTG GGAGACCCGT
ATACCAAAAA ACTACAACAA CTTTGTCTCG TTGATGGAAC AACTGTATGC CACGGGCAGA
GTTCCTCCCA AAGGCGAGCC CCTCATAGAG CTGTATAAAA AAGACCTCTC TACTCTATTG
AGGGAGCTAG GCGGTCGTTG GGTAGTGTTA CATGAGAGCG GTGTGAAAAA ACCGTTTATA
GAGCTTGGGG CGGCGTTGTT AAACTCTGTT GTTGTAATAG GCGGATTTCC CCATGGAGAT
TTTACAAATA AGTGGGTTCT CGAGAAGGCA GACGCTATAT ATAAAATAGG AGACGAAACT
ATGGATGCGG CGCAAGTGGT TTATAGAGCT ATAACTGCGG CAGAAGTCGC TGCCGGCCTT
CTATGA
 
Protein sequence
MIVVLAESAL ELVPRELWNH PVIQADAKRR GKKPGEILLD RARHHLAMSS LRDASKRGRP 
DIVHQVLLVF QYSLLNKRGL GRIYIHTQGD YTIYVRWETR IPKNYNNFVS LMEQLYATGR
VPPKGEPLIE LYKKDLSTLL RELGGRWVVL HESGVKKPFI ELGAALLNSV VVIGGFPHGD
FTNKWVLEKA DAIYKIGDET MDAAQVVYRA ITAAEVAAGL L