Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1803 |
Symbol | |
ID | 4617695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1635792 |
End bp | 1636457 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639784887 |
Product | ribosome biogenesis protein |
Protein accession | YP_931295 |
Protein GI | 119873288 |
COG category | [S] Function unknown |
COG ID | [COG1756] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.022092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.296556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGTCG TATTAGCCGA ATCTGCGCTT GAGCTTGTGC CTCGGGAGCT CTGGAACCAC CCAGTTATAC AAGCAGACGC CAAGAGGAGA GGCAAAAAGC CGGGGGAGAT TCTTCTAGAT AGAGCGCGAC ATCATTTAGC TATGTCGTCG CTAAGAGATG CGTCTAAGAG AGGTAGGCCA GATATCGTAC ATCAAGTGCT TTTGGTGTTT CAATACAGTT TGCTAAACAA AAGGGGCCTT GGGAGAATAT ACATACACAC CCAGGGAGAT TATACAATAT ATGTGCGTTG GGAGACCCGT ATACCAAAAA ACTACAACAA CTTTGTCTCG TTGATGGAAC AACTGTATGC CACGGGCAGA GTTCCTCCCA AAGGCGAGCC CCTCATAGAG CTGTATAAAA AAGACCTCTC TACTCTATTG AGGGAGCTAG GCGGTCGTTG GGTAGTGTTA CATGAGAGCG GTGTGAAAAA ACCGTTTATA GAGCTTGGGG CGGCGTTGTT AAACTCTGTT GTTGTAATAG GCGGATTTCC CCATGGAGAT TTTACAAATA AGTGGGTTCT CGAGAAGGCA GACGCTATAT ATAAAATAGG AGACGAAACT ATGGATGCGG CGCAAGTGGT TTATAGAGCT ATAACTGCGG CAGAAGTCGC TGCCGGCCTT CTATGA
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Protein sequence | MIVVLAESAL ELVPRELWNH PVIQADAKRR GKKPGEILLD RARHHLAMSS LRDASKRGRP DIVHQVLLVF QYSLLNKRGL GRIYIHTQGD YTIYVRWETR IPKNYNNFVS LMEQLYATGR VPPKGEPLIE LYKKDLSTLL RELGGRWVVL HESGVKKPFI ELGAALLNSV VVIGGFPHGD FTNKWVLEKA DAIYKIGDET MDAAQVVYRA ITAAEVAAGL L
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