| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1764 |
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| Symbol | |
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| ID | 4617755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 1602555 |
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| End bp | 1603337 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639784849 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_931257 |
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| Protein GI | 119873250 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACTTTG CAGTAATAGG CACACACGTG AGGGGGAAGT CGGCGAGCCC CGCCATGCAC
AACGCCTCTT TCAAAACCCT AGGGATCAAC GCAGTGTATA TAGCCCTCGA CGTGCCTAGA
GAGGAGCTAC CCTGCTTTCT GCAACTCGCC AGGCTAAACC TAAGAGGTTT CAACGTCACT
ATCCCCCACA AGGAGGAGGT GGTGAAGTAT CTCGACAGCG TTGCGGCAGA CGCCAGAGCC
ATAGGCGCTG TGAACACGGT GCTGGTGGAG AGGAACCTCC TAGTCGGCTA CAATACAGAC
GCCTCGGCCC TCTACCAGCT GGCAAGCTCC CACATGAAGG GAGCAGACGT GTTGATAGTG
GGCGCTGGAG GCGCCGCGAG AGCCGCCCTC TTCGCCGCGA TAAAGGCCGA GGCTAGGGCC
GTCTACATCA CCAACAGGAC TTACGAGAGG GCCGAAGCCC TCGCCAGGGA GTTCGCCGAG
AAGTTCAAGA GGGAGGTAAA AGCCGTGAGA GGCCCCGTCA AGGCGGACGT GGTCATAAAC
GCGACTCCCG TCTACGACGC CGTGGTGGCA GATCTCAGCG GCGCTTCTCT CTACGTGGAC
TTCGCCTACA TACCAACCCC CAGGACAAAG ATGGTGGAGG AGGCCCAGAG GCTCGGGATA
AAGGTGATAG ACGGGGTAGA TCTGTTGGTG GAGCAGGGGG CTCAAGCCGA GAAGATCTGG
CTCGGAGTAG AGCCGGACAG AACAGTTATG AAGAGGGCCG TCCTCGAGTT CCTAGGAATA
TGA
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| Protein sequence | MYFAVIGTHV RGKSASPAMH NASFKTLGIN AVYIALDVPR EELPCFLQLA RLNLRGFNVT
IPHKEEVVKY LDSVAADARA IGAVNTVLVE RNLLVGYNTD ASALYQLASS HMKGADVLIV
GAGGAARAAL FAAIKAEARA VYITNRTYER AEALAREFAE KFKREVKAVR GPVKADVVIN
ATPVYDAVVA DLSGASLYVD FAYIPTPRTK MVEEAQRLGI KVIDGVDLLV EQGAQAEKIW
LGVEPDRTVM KRAVLEFLGI
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