| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1755 |
|---|
| Symbol | |
|---|
| ID | 4617938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1587901 |
|---|
| End bp | 1589349 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639784839 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_931249 |
|---|
| Protein GI | 119873242 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGA GACAGAGTCT TGAAAAGGTG GAGGAGTGGC GGAAGATCGT GAATTCTCTG
AGAGAGGCTG GAGTAGAGCC CTATCCCCAC TCCTTCCGCA TAACCCACAG CGTTAGGGCT
CTTAACGAGC TGAGGAGGCA GGCGCTTCTA GAGCCTTGGG TTGGCCTTGT GATAAGAACT
GCTGGTAGGG TAACTGACAT AAGGAGACAT CCTAACGTTG TTTTTATAGA CCTTTATGAA
GACGGGGCAA GGTTTCAAGT CATGGCAGAT CCGAGACACT CACTCCTAGA CTACATATGG
CGGGGAGATT ACATCGGCGT AGAGGGGGTA ATAGTTAAGA CGCAACGGGG TGACTATGCA
GTGAGGGCCT CCTCCCTAGT CCTCTTGGCT AAGGCGGTTC AGCCTCTGCC GGAGTGGGGG
AAGGTGGACC GGGATTCGCC GTTTTACATG AGATACCGCT CGGTGGCTAT GGTCTTGGAT
CTCCAGCTCC GGTGGAGGAT CGCGGCGAGG GCTAAGTTTA TACAGGCGCT GAGAGAGGCC
ATGTGGAAAC GCGGCTTTAT AGAGATCCCC ACGCCGGTTC TCCAGCCGAT CTACGGCGGC
GCCGCCGCGC GCCCCTTTAC GACGAAGATC TGGGCTATAG ATGAGGAGTG GTACCTCCGT
ATATCCCCCG AGCTGTACCT AAAGCGCTAC ATCATCGCCG GTTTTCCCAA GGTGTTCGAG
GTGGGGCCTC AGTTCCGCAA CGAGGATATC GACGCGCTTC ACAACCCCGA GTTCTGGTCT
CTCGAGGCAT ATCAAGCCTA TGCTGACTAC AACGACATGA TGAAGCTGAC GGAGGAGGTG
GTGTACGAGG CCGTGTCCGC CGTCTTAGGC ACAGGCGTTG TGAAGTATAG AGACCAGACC
ATAAACTTCT CCCCGCCCTG GCGCAGGATC ACCCTCCACG ACGCTCTTAG GGAGTACGGG
GGCGTCGACC CGGATAGACT TACGGACGAC CAGATAAAGG AGAAGCTCAG GGAGCTGCAG
GTCCCGGTCA AGGTCTACAA CAGGGGTATC GCCCTGGTGA AGCTCTTCGA GAAGCTGGTG
GAGAAGAAGC TGGTAGAGCC CACCTTTGTG CTGGACTACC CCGAGGAGTC CACGCCGCTT
TGTAAACCCC ATAGGGAGAA GAGGGGCCTC GTGGAGAGGT TCGAGGCCTT CGTGGGGGGG
CACGAGGTGG CTAACGCCTA CACGGAGTTG AACGACCCGG TGCGTCAGTA TGAATACTTC
GTGAGAGAGG AGGAGCTGTT TCCAAAGGAG GAGGCGCACC CCCTCGACTG GGATTTCGTC
GAAGAGCTGT CGTTTGGCAT GCCTCCCACA GGCGGGGTGG GCATAGGCAT TGATAGGCTG
GCGATGGTTA TTACAAACGC CGAGTCTATC AAAGACGTAA TACCCTACCC AATTGTGAAG
AGGGCATAG
|
|---|
| Protein sequence | MAVRQSLEKV EEWRKIVNSL REAGVEPYPH SFRITHSVRA LNELRRQALL EPWVGLVIRT
AGRVTDIRRH PNVVFIDLYE DGARFQVMAD PRHSLLDYIW RGDYIGVEGV IVKTQRGDYA
VRASSLVLLA KAVQPLPEWG KVDRDSPFYM RYRSVAMVLD LQLRWRIAAR AKFIQALREA
MWKRGFIEIP TPVLQPIYGG AAARPFTTKI WAIDEEWYLR ISPELYLKRY IIAGFPKVFE
VGPQFRNEDI DALHNPEFWS LEAYQAYADY NDMMKLTEEV VYEAVSAVLG TGVVKYRDQT
INFSPPWRRI TLHDALREYG GVDPDRLTDD QIKEKLRELQ VPVKVYNRGI ALVKLFEKLV
EKKLVEPTFV LDYPEESTPL CKPHREKRGL VERFEAFVGG HEVANAYTEL NDPVRQYEYF
VREEELFPKE EAHPLDWDFV EELSFGMPPT GGVGIGIDRL AMVITNAESI KDVIPYPIVK
RA
|
|---|
| |