Gene Pisl_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1734 
Symbol 
ID4616559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1571156 
End bp1571854 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content48% 
IMG OID639784817 
Producthydrolase 
Protein accessionYP_931228 
Protein GI119873221 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTA TACTCATAGA CCTAGACGGC ACATTAATAC CTTTAAGCGC CTGGAGACCT 
ATATTTATCG AGCTATGCGA AAAAATTGCA GAAGAGACAG GAGTTCGGCC TGAGGAGGTG
TGGAGAAGAG CCAGACAGAA AAACCTAGAG TTGTTACGCG CCTTAGATTG GAAAGCCTTT
GATTGGCAAG AGATTTTTAC AGAGGTGGCG AGGGAGTTTG GCTTAAGCCA AGCGCCAGAC
ATTGTTGTAT CTCTACAGAG ACACCTCCAC ACCTTCGCCC TCAACGAGGG GGCGGCGGAG
GCGCTGGTAA AGCTAAAGGA GATGGGACAC CGGGTCGAGA TCGCAACAAA CGGCCACGCG
CGGTACCAAC TTCCCGTCAT ACGCCGCCTG GGTCTAGATC GGCTAGTAGA CGGCGTGAGA
ACCTCAGACA CGTACCAATG CCCAAAGACG TGCCCAGAAT ACTTCAAAAA CGCAGATGTG
ATTATAGGCG ACAACCCCGT TTTTGATGTG TATTTCCCAA AGAAGCACGG GCTAATTACA
GTTTTCTATG GAGACTGGAA AAAAGAATCT ATAGAACATT CGCAAAGGAT GTCTATAGAC
TTAACAACGA CAGAGCCAGA CGCAGTAGTA AATACGTTAA GAGATATACC AGATGTAGTG
GAGAGACTGT TGGAGAAAAA GACCGCCTTT CCCATGTGA
 
Protein sequence
MATILIDLDG TLIPLSAWRP IFIELCEKIA EETGVRPEEV WRRARQKNLE LLRALDWKAF 
DWQEIFTEVA REFGLSQAPD IVVSLQRHLH TFALNEGAAE ALVKLKEMGH RVEIATNGHA
RYQLPVIRRL GLDRLVDGVR TSDTYQCPKT CPEYFKNADV IIGDNPVFDV YFPKKHGLIT
VFYGDWKKES IEHSQRMSID LTTTEPDAVV NTLRDIPDVV ERLLEKKTAF PM