| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1729 |
|---|
| Symbol | rps3p |
|---|
| ID | 4617487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1566913 |
|---|
| End bp | 1567566 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639784812 |
|---|
| Product | 30S ribosomal protein S3P |
|---|
| Protein accession | YP_931223 |
|---|
| Protein GI | 119873216 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCTG TACAGAGGAG GTTGCCCGTC TATAAGAAAA TACTGGAGGA AAATAAGAAG
AAGTGGATGA TTAAGGAGTT TCTCGAGTAT AAACTTAGTA AATATGGCTA TATAGACTCT
GAAATTTTGA AAACCCCGCT TGGCACACGT ATTGTGATAT ATGCAGAGAG GCCTTCTAGG
ATTATCGGCA AGAAGGGCGT AATTGTCAAG GAGATTAGTA ATATACTGGT AAACAAACTC
GGCGTAGAAA ACCCACAAAT CGATGTTATT GACGTTTCTA AGATAGAGGC GCCTGAGATG
TTCCCCAAGG TTATCGCCTA CCGTATTGCC AACGCCATGG CTAAAGGAGT GAGGTTTAGA
CGCGTTATGT TTGTAGCTGT GAGACAGCTT ATGGAGGCTG GGGCCAAGGG GTTTGAGATT
GTGGTGAGCG GAAAGCTCTC GACAGAGAGG GCCCGTTTTG AGAAACTTAC ATATGGCAAG
CTCTATAAGA TCGGGTACGA CGCAAAGAAC AGGGTTAGAA GAGCTGTTGT CCATGTGCTT
CTTAAGCCTG GTATATATGG CATAGAGGTA AGGATCGCGC CAGCCTCTTT GCAATATTCA
GACGAATACA AAATAAAGCC GCCGGTGAAA CCTGAGACTA CTTCACAACA ATAA
|
|---|
| Protein sequence | MSAVQRRLPV YKKILEENKK KWMIKEFLEY KLSKYGYIDS EILKTPLGTR IVIYAERPSR
IIGKKGVIVK EISNILVNKL GVENPQIDVI DVSKIEAPEM FPKVIAYRIA NAMAKGVRFR
RVMFVAVRQL MEAGAKGFEI VVSGKLSTER ARFEKLTYGK LYKIGYDAKN RVRRAVVHVL
LKPGIYGIEV RIAPASLQYS DEYKIKPPVK PETTSQQ
|
|---|
| |