Gene Pisl_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1718 
Symbol 
ID4617468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1553318 
End bp1554373 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content46% 
IMG OID639784801 
Productmyo-inositol-1-phosphate synthase 
Protein accessionYP_931212 
Protein GI119873205 
COG category[I] Lipid transport and metabolism 
COG ID[COG1260] Myo-inositol-1-phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.537693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.11872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCA GAGTCGGTAT TGTAGGAGTG GGAAACTGTG CCTCTGCTCT TGTCCAAGGC 
ATCGAGATGT ATAAACATAA TCCAAATCTA GAACCAATAG TTGCTTTTAG AGAGATAGGT
AGATACAGGC CTCACGACAT AGTGTTTACA TCGGCTTTTG ATATCGATGC TAGAAAAGTT
CACGTAGACT TAGCTGATGC TATATTTCAA CCTCCAAACA ACGCGACAGT GGTTTTTAAG
CCGCCGAAAC TAGGGGTGAT AGTACGCCCA GGCCCAGTTC TTGATGGGGT TCCAGAGGGG
GGTCTCGTTA CAAAGGTTGT CGAGGGTTCT GTGGAAGATG TTGTGAAAGA GCTTAATTCT
ACGAATACAG AGATTTTAGT AAACTATTTG CCAACAGGCG CAAAAAAAGC TGCAGAGGCG
TATGCAGAGG CGGCATTAAG AGCCGGCGTC GCGTTTATAA ACGCCATGCC AGCTCCGGTG
GCTACGAGCG AGTATTGGCA AAAGAGGTTT GCAGAGAGAA ACTTGCCGTT GTTAGGCGAC
GATACGCAGA ATCAAATAGG CGCAACAGTG CTTCATAAGA CTTTAGTGAG GTTGCTGGCG
CTGAGAGGCG TAAAAATAAA ACACACCTAT CAGATAAATG TAGGGGGCAC TCCTGACTTT
GTAAATCTTA TGTATAGACG CGGCGATAAA GAGAAGACAA AGACGGCTGC AGTTAAAATG
ATGGCCGTGG GACAAGAGTT TGATGCGTAT ATCTCGCCAG TGGCTTATAT AGAATTCCTC
GGCGATAGAA AGATAGCACA TATGCTTATA GAGGCCGAAA TTTTTGGCGG TCTTCCCATC
AGAATTGATG TCACTCTAGA TGTTCACGAT GCTTGGAATA GCGCAGCAGT TGTAACAGAC
GCCATAAGAC TCGCCAAATT GGCACTTGAT AGAGGAATAG GTGGGCCGTT AATAAGTGCA
TCGGCGTGGG GGTTTAAAAA CCCGCCTGTC CATATGAGTC CCGATGAGGC CTATAGAGCC
GTCGTAGAGT TTATAGAGGG TAAACGCGAT AGATGA
 
Protein sequence
MPIRVGIVGV GNCASALVQG IEMYKHNPNL EPIVAFREIG RYRPHDIVFT SAFDIDARKV 
HVDLADAIFQ PPNNATVVFK PPKLGVIVRP GPVLDGVPEG GLVTKVVEGS VEDVVKELNS
TNTEILVNYL PTGAKKAAEA YAEAALRAGV AFINAMPAPV ATSEYWQKRF AERNLPLLGD
DTQNQIGATV LHKTLVRLLA LRGVKIKHTY QINVGGTPDF VNLMYRRGDK EKTKTAAVKM
MAVGQEFDAY ISPVAYIEFL GDRKIAHMLI EAEIFGGLPI RIDVTLDVHD AWNSAAVVTD
AIRLAKLALD RGIGGPLISA SAWGFKNPPV HMSPDEAYRA VVEFIEGKRD R