Gene Pisl_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1714 
Symbol 
ID4617816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1551086 
End bp1551466 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content44% 
IMG OID639784796 
ProductS-adenosylmethionine decarboxylase proenzyme 
Protein accessionYP_931208 
Protein GI119873201 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.766002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0497565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAA CAACCCAAGT CAAAACCCCC ATAGTGGGGA AACATGTCTA TGGCGAATTA 
TATGGAGTAG ATGAAGCGCT TCTTCGAGAT GAAGAAAAAC TCAGAAGGAT AGTGATAGAG
GCTGCCCACA TTGCAAAAAT GCACCTAGTT GAGGTAAACT CTTGGAGATT CAAGGGTGGA
GATAAAGAGG GTGTTTCCGT AATCGCACTA GTGTTAGAGA GCCACATAGC TATACATACG
TGGCCTGTAT ATAACTACGC CACGGTAGAT GTATATACAT GCGGAGAGCA TTCAGACCCT
ATGGCTGCCT TCCGTTATAT AGTATCACAA CTAGCGCCAA AGAGATTCAC CGTGAACTAC
TCAGATCGCT CATACAAATA A
 
Protein sequence
MQTTTQVKTP IVGKHVYGEL YGVDEALLRD EEKLRRIVIE AAHIAKMHLV EVNSWRFKGG 
DKEGVSVIAL VLESHIAIHT WPVYNYATVD VYTCGEHSDP MAAFRYIVSQ LAPKRFTVNY
SDRSYK