| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1709 |
|---|
| Symbol | |
|---|
| ID | 4618193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1545803 |
|---|
| End bp | 1546228 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639784791 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_931203 |
|---|
| Protein GI | 119873196 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.478002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0298137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGACG AGCCGTCATA CGAGCTTGCC TATAAATTCA GACGTATACT TGTGCCTATT
TCGCCGATGA ATCCAGTAAG ACTAAGAGAG TTGTTAAATG TAGCGGCAGA CTTCGGCGAG
AGATACGGTG CTGATATAGT ATTCCTGTAC GTATCTATTA GTGAAAACGA CCCAACGGCT
GAACAATTAA AGACTACAGT AGAAGAATTT ATGAACAAGA AAGGCATTAA ACATTTTTTC
AAAGTTAGGA AAATGGGTGA GGGGGAGACA GTTGCGTCTG AGATTGTAAA GGAGCTTTCT
GAAAATAGTT ATGATATGGT GATTCTTTTA TCAAGGGGCT ACTACGGCGC CTCTGCCCTT
CTATACAATA GTACATCTGT CGCAGTTGCG TTGGCGGCCA ACACTTCGGT GTTAATACTG
CGGTAG
|
|---|
| Protein sequence | MVDEPSYELA YKFRRILVPI SPMNPVRLRE LLNVAADFGE RYGADIVFLY VSISENDPTA
EQLKTTVEEF MNKKGIKHFF KVRKMGEGET VASEIVKELS ENSYDMVILL SRGYYGASAL
LYNSTSVAVA LAANTSVLIL R
|
|---|
| |