| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1706 |
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| Symbol | rps17p |
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| ID | 4618091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 1543645 |
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| End bp | 1544088 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639784788 |
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| Product | 30S ribosomal protein S17P |
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| Protein accession | YP_931200 |
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| Protein GI | 119873193 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03630] archaeal ribosomal protein S17P |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0141131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTTG TAAAACTCCA AAATAGGCCT AAAATTGGCG ACGTTATTAC TCTACCTAAT
GGGAGAAAGG TAGAGGTTAG AGATATAGGC ATTCCCTATA TACTCCCACC AAATGCGGTA
TGCGACGACC CTCTTTGCCC ATGGCATGGC CATCTTAAAA TAAGGCTGAA GTTGTTAGAA
GTGACTGTCG AGAAGGTGAG GATGCATAAA GCCGCTGTTG TGTTACACGA GTGGGTCCAC
TATATACGTA AGTACAATCG TTATGAGCGG CGGAGGAGGA GGATACACGT TAGGGTACCT
GAATGTATAG AAGTGAAGCC AGGAGACAAG GTAATAATCG CAGAAACTAG ACCACTTGCA
AAAACAATAT CGTGGGTAGT GATAGGGAAA AAAGAGGATG TTACTGTGTG GAAAGCTAAA
CACGAAGTTT TACAAACAGA CTAG
|
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| Protein sequence | MTVVKLQNRP KIGDVITLPN GRKVEVRDIG IPYILPPNAV CDDPLCPWHG HLKIRLKLLE
VTVEKVRMHK AAVVLHEWVH YIRKYNRYER RRRRIHVRVP ECIEVKPGDK VIIAETRPLA
KTISWVVIGK KEDVTVWKAK HEVLQTD
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