Gene Pisl_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1698 
Symbol 
ID4618174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1537754 
End bp1538458 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content35% 
IMG OID639784780 
Producthypothetical protein 
Protein accessionYP_931192 
Protein GI119873185 
COG category[S] Function unknown 
COG ID[COG4920] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0781554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTC CGCAGTATAT GAGGCGTGCC ATCATAAGTA TTTTGTCAAT TCTAATTTTT 
GCGGCAATAC TAACATTCTT CCCGGCTAGT TATTTTGAAG CAATATTATT ATACTTGATA
TTGTTCTTTG TAATATCAAT AGTGCTCAGC TACAAGACTT ATAGAAGGGG GTTGACAACG
GTACAGGAAA TCTCTAAGGG GAAGCCTATC ATTGAAATAG ATGAAAAAGA AATCAATAAA
CTTATAGAAA AAGATAAAGA ACTCTATAAG GAGTATAGAA AATTCACAAA AGCATCTCTT
ATGCCACTAC TAACACTCCC AATATTTATC ATATTGGCTA CTCTCCTCTT TCCAGTAGTG
CCCCACGTCG TAGAATCCTC GCTAGGACCA CTTATCGGTA CTACAATAGC GAGGTTTCTA
GGCTATGTAA CTCTTTTCGG TCTTTTCGCA ATTGTTTCAA TACCTTTATT CAAACCGCCT
ATGGTTCCAA GAATTGTCAG AAGTCTCAGA GTATACGAAA CTGGAATAGT AATTGACAAG
ACTTTTGGCT TTAAAGCCCC GCTTTATGTC AGCGAGTATA GAATTAGTGA AGAACGTAAA
TTTATAGAAT TTAAGCTCAA TAACCAAATA TTTAGAGTCT ATTACAAAGA TATAAAAGAG
CTTGATAGTA TTTTGTCTAA GCTTATAAAG CCTTTAAAAC AGTGA
 
Protein sequence
MSLPQYMRRA IISILSILIF AAILTFFPAS YFEAILLYLI LFFVISIVLS YKTYRRGLTT 
VQEISKGKPI IEIDEKEINK LIEKDKELYK EYRKFTKASL MPLLTLPIFI ILATLLFPVV
PHVVESSLGP LIGTTIARFL GYVTLFGLFA IVSIPLFKPP MVPRIVRSLR VYETGIVIDK
TFGFKAPLYV SEYRISEERK FIEFKLNNQI FRVYYKDIKE LDSILSKLIK PLKQ