Gene Pisl_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1684 
Symbol 
ID4617184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1526126 
End bp1526521 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content43% 
IMG OID639784766 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_931178 
Protein GI119873171 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0244659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTG AAGAGTTTGG CGAGGTCATA AGGTTGCAAA CTCCCGTGCG CACAGTAAGA 
GAGGCCGCAC AAGCGATTGG AGTAAGCGAG GATAAAATTG TAAAGACTAT AGTTGTTTAC
TGCAACGGTG AATTCAGAGC ATATGTAATA CGTGGAACTA AAAGACTTAA TACCAAATTG
TTAGGTTGCC GCCTTGCTAC ACCTGACGAG GTATTTACAG CCACTGGCTA CTCTGTGGGA
GGCGTACCAC CGGTTTTAAA CATCCCAGTA TATATAGACA GAGAGCTACT TAGAGAAGAC
TATGTTTATG GAGGCGGAGG CGACGAATAC TCTCTCCTAA AGTTTAAACC CATAGAACTA
GTAAAAAGAG GTTTTGTAAC ACCTATCGAA CTATGA
 
Protein sequence
MRLEEFGEVI RLQTPVRTVR EAAQAIGVSE DKIVKTIVVY CNGEFRAYVI RGTKRLNTKL 
LGCRLATPDE VFTATGYSVG GVPPVLNIPV YIDRELLRED YVYGGGGDEY SLLKFKPIEL
VKRGFVTPIE L