Gene Pisl_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1678 
SymbolpheT 
ID4616955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1522137 
End bp1523693 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content43% 
IMG OID639784761 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_931173 
Protein GI119873166 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00471] phenylalanyl-tRNA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0290511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGATTA TAGAAATAGC CAAATTCGAC TTGGAAAGAC TCGCCAACAT AAAATTTGAG 
GAGGCCGCCA AACTGTTGGA GTACGTAAAG TGTGAAATAG AGGAGGACGT CGGCGAGAAG
GTTAGGCTAG AGGTATCTCA TGATCGCCCA GATCATTTCT CTGTAGAGGG CTTGGCGAGA
ACGCTCAAGG GTATTGCCGA AGTTGAAGTC GGGTTGCCGC GTATAACGTT ATTACAGTCT
TCTATAGAAC TTAAGGCCGA GTACATCGAA GAGAGGCCCT ACATATCCAT GGCCGTAGTC
CGTGGAGTTA AGCTAGACAA TGAAGCTATA AGACAACTCA TACAGCTACA GGAAAAGCTA
CACGACACTT ACGGGAGAGG GAGAAGGAGA TTTGCAATTG GTTTCTATGA TATCTCGAAG
ATAAAGCCGC CAATATATTA CAAAAGAGTT AGCCAGGAGG ATGAATACGT ACCCCTGGGA
TTTGATAAGC CGGTGAAGAT ATCGGAGATG TATAAACTTA CAGAACAAGG CATTAAGTAT
TCGACCCTTA TAAACAAAGA ACGGCCACCT GCATTAGTCG ACAGCGCGGG ACAGATTATG
GTCATAATAC CAGTATTAGG TTCCGAGTGT TGTAAAATCA CCGAAGATAC ACATGACGTC
TTGATAGATG TCACAGGTAC AGACTTACGC GCTATAAACA ACGTAATGTC AATATTAATT
TATGCGCTCT TAGAACGTAG TTCCACGAAG ACCGTGGAGA TAATTACAGG AGGACATGCA
TACAGACATA CATACCACAG AATTGTCGTT GACTTAGAGA ATATCAACGA CCTGTTAGGC
ATTAGACTTA GTATACAAGA CTTCGTAAAA CTCGTGGAAA AAGCCCGCCT TAGTTACCAA
GAGGGGGGAG TTCTAGCGCC TCCATATAGG ATAAATATGT TATCTTGGGT TGATGTTGCA
GAAGAGGTGG CAATTATGTT AGGTTATAAT AACTTCCCAA GAGAAGCGCC TAAAATTTCG
ACAAGCGGAA AGCGTCATAT AACTGAGGTG TTAACAGAAG AGGTGCGAAG GATACTACTA
TCAATGGGTT TCGTGGAGGT GAATAACTAC GTGTTGACAG ACAGCTCCAT TGCCAATATA
TGCAAGCCTG CTCACATCAT TAACCCTATC TCAGAGCTAT ATGGTTATGT GAGGTGTTCC
ATGATCACGC AATTAATCGT AACTGCCTCG ACAATGAGAA GAAAAGAGAT AAAACTATTC
GAAGTAGGTG ACGTTGTAGA AAATGGCAGA ACTTGGAGAG ATGCGACATT TTTATTGAGT
CGAGACGGCG TAACTTTAAC CGACGGGCTC TCTGTAATTA AAACACTATG TAATCGCTTA
GGTTTTACCT GTCAAATATC GGAAACGTCA TTAGAATGGG GGATTCCAAA TAGAGCGGCG
AGTATAAGAG GCGATGTAGT TGGATATATT GCAGAGGTAA ATCCAGGACT ACTACTAAAA
CTAAGACATA CGCTCCCTAC CGTCGTAGGA GTGTTGAGAC TTGAAAACAT TAAATAG
 
Protein sequence
MPIIEIAKFD LERLANIKFE EAAKLLEYVK CEIEEDVGEK VRLEVSHDRP DHFSVEGLAR 
TLKGIAEVEV GLPRITLLQS SIELKAEYIE ERPYISMAVV RGVKLDNEAI RQLIQLQEKL
HDTYGRGRRR FAIGFYDISK IKPPIYYKRV SQEDEYVPLG FDKPVKISEM YKLTEQGIKY
STLINKERPP ALVDSAGQIM VIIPVLGSEC CKITEDTHDV LIDVTGTDLR AINNVMSILI
YALLERSSTK TVEIITGGHA YRHTYHRIVV DLENINDLLG IRLSIQDFVK LVEKARLSYQ
EGGVLAPPYR INMLSWVDVA EEVAIMLGYN NFPREAPKIS TSGKRHITEV LTEEVRRILL
SMGFVEVNNY VLTDSSIANI CKPAHIINPI SELYGYVRCS MITQLIVTAS TMRRKEIKLF
EVGDVVENGR TWRDATFLLS RDGVTLTDGL SVIKTLCNRL GFTCQISETS LEWGIPNRAA
SIRGDVVGYI AEVNPGLLLK LRHTLPTVVG VLRLENIK