| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1675 |
|---|
| Symbol | |
|---|
| ID | 4617843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1520213 |
|---|
| End bp | 1521172 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639784758 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_931170 |
|---|
| Protein GI | 119873163 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0148653 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACAATG TTGCCGATAT TTTCTCTGGT GCTGGTGGAT TTGGGTTAGG GTTCAGAAAG
GCGGGTTTTA AGATAAAGGT AGCAGTTGAA ATAGATAGAG ACGCCGCCCG CACCTACAGC
GCAAACCATC AAAATACGGT CGTTCTCCAG GAAGATGTAG CAAATGTGGA TTATAAAGAC
TTAGTTAAAT ACGGCGGGGA GATAAAAATC ATTATCGGTA GCCCGCCTTG CGAGCCTTTT
ACAGCCGCAA ACCCCAACAG GATGGAGGAT CCAGCAGATA GGCTTTATGT AGATCCGGCC
GGCCAGTTGA CTTTAGAATT TATCAGATTA GTAGGAGAGT TAGGGCCCGA GGTTTTTGTA
ATGGAGAATG TCGCCGCGTT GGCGGAAGAG CCTTTGAAAA GCTACATTGA GAGAGAATTC
AAAAGAGTGG GTTACCATGT GTATTTTAAC ATACTTCATG CAGAAGACTA TGGAGTTCCC
AGCCGGCGTC GTCGAGTCTT TATTTCAAAC ATAGAAATTA AGCCGCCGAA AACACGTCGG
GTTACAGTTA GAGAAGCTAT AGGAGATATG CCGCCTCCAG ATAGCGGACA ACTCCCAAAT
CACGAGACAG TGAGTCTCAG CCCCAAGAAA CAACAGAGGA TAACTAGGCT CAAGCCAGGC
GAGGCCCTCA TGAGATATAA AGGTGCCGTG GGATTCTATG AGAACTATAT AAGACTCATA
TGGGATGATA TAGCTCCTAC AGTTATGGGC TCTAGACGAT TTGTACACCC AGAGGAACAT
AGAATTCTAA CTGTACGCGA ACAAGCAAGA CTCATGGGGT ATCCAGACGA CTATGTGTTC
TATGGTTCAA AAGATGCACA ATATAACCAA GTGGGAGAAA GCGTCCCCCC ACCTCTAGCA
TACGTCATAG CGTTAGAGGT TAGAAAATTT TTAGAAAGAC GTAATTACAG CCGTGGCTAA
|
|---|
| Protein sequence | MYNVADIFSG AGGFGLGFRK AGFKIKVAVE IDRDAARTYS ANHQNTVVLQ EDVANVDYKD
LVKYGGEIKI IIGSPPCEPF TAANPNRMED PADRLYVDPA GQLTLEFIRL VGELGPEVFV
MENVAALAEE PLKSYIEREF KRVGYHVYFN ILHAEDYGVP SRRRRVFISN IEIKPPKTRR
VTVREAIGDM PPPDSGQLPN HETVSLSPKK QQRITRLKPG EALMRYKGAV GFYENYIRLI
WDDIAPTVMG SRRFVHPEEH RILTVREQAR LMGYPDDYVF YGSKDAQYNQ VGESVPPPLA
YVIALEVRKF LERRNYSRG
|
|---|
| |