| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1667 |
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| Symbol | tfb |
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| ID | 4617859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 1512821 |
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| End bp | 1513822 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639784750 |
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| Product | transcription initiation factor IIB |
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| Protein accession | YP_931162 |
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| Protein GI | 119873155 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.831794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00863869 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTCGT CAAGTCCGAC GTCTTCTGGG AAACCCCTTA AGCTACGTAT AGACAGAGAT
AATGAGGGGT ATTTAAGTCT TGTTACAGAT ACTGGCGAGG TTTATCGGTG TCCTATTTGT
GGTAATGACA GGTTTGTATA CAACTACGAG AGGGGGGAGA TCGTCTGTAT TGTGTGTGGC
GCGGTAGTAC AGGAGCAACT ATTAGACCTA GGGCCTGAAT GGAGGGCTTT TACTTCAGAG
GAGAAAGGAC AGAGGGCGCG TACAGGGGCG CCGTTGACCC GCCTAATATC TGAGGCGCTT
ACAACAGTTA TAGACTGGAG AGATAAAGAT GTCTCGGGCA AGGAGCTTGA CATAAAGCGG
AAGCTTGAGG TAATCAGGTT AAGGAAATGG CAAACAAGAG CCCGTGTTCA GACATCTTAT
GAAAGAAATT TCATACAGGC AGCTCAAGAG CTAGAGAGAT TGAGAAGTTC TATGGGCGTA
CCGAGGCCAT GTGTTGAGCA AGCGCTCGAG ATTTATAGAC AAGCGCTTGA GAAAGAGCTC
GTAAGAGGCA GATCTGTGGA GGCTATGGCT GCAGCCGCCT TATATATGGC ATGTCGTATG
ATGAAAATGC CGAGACCTCT TGATGAGTTA GTGAGATATA CTAAAGCCTC AAGGAGAGAG
GTGGCTCGTT GCTATCGCTT ACTTCTCCGC GAGCTTAATG TCAAGGTTCC AATAAGCGAC
CCGGTGCTCT ATATATCGAG AATAGCTGAG CAGTTAAAGC TCAGCGGCGA GGTAGTTAAG
ACAGCTATCG AGATTTTACA GAAGGCGAAA AAAGCCGGGA TAACAGCCGG AAAAGATCCT
GCAGGGCTAG CCGCCGCGGC GGTGTATATA GCGTCGTTGC TACATGGCGA TAATAGGACT
CAAAAAGACT TCGCTGTTGC AGCTGGCGTC ACTGAGGTGA CAGTTCGAAA TAGGTATAAA
GAATTAGCAA AAACGCTTAA TATAAAAGTT CCTGTAAAAT AA
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| Protein sequence | MSSSSPTSSG KPLKLRIDRD NEGYLSLVTD TGEVYRCPIC GNDRFVYNYE RGEIVCIVCG
AVVQEQLLDL GPEWRAFTSE EKGQRARTGA PLTRLISEAL TTVIDWRDKD VSGKELDIKR
KLEVIRLRKW QTRARVQTSY ERNFIQAAQE LERLRSSMGV PRPCVEQALE IYRQALEKEL
VRGRSVEAMA AAALYMACRM MKMPRPLDEL VRYTKASRRE VARCYRLLLR ELNVKVPISD
PVLYISRIAE QLKLSGEVVK TAIEILQKAK KAGITAGKDP AGLAAAAVYI ASLLHGDNRT
QKDFAVAAGV TEVTVRNRYK ELAKTLNIKV PVK
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