| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1662 |
|---|
| Symbol | |
|---|
| ID | 4616809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1510376 |
|---|
| End bp | 1511104 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639784745 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_931157 |
|---|
| Protein GI | 119873150 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1709] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.126051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.00273483 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGGTTG TAATTATGGA TTATCACCAT ATCGGAATTT ATATAGCTGG CGATATTATA
ATGTCAGAAA ACCCGGGAGA GGCAATAAAG AAATGGAGAT TGATATTTGG GCTTACACAA
ACAGCTGTAG CAACTAAGTT GAATACCTCG CCAAGCGTAA TAAGCGACTA TGAATCTGGA
AGAAGAAAGT TTCCAGGCTC TCGCTTTGTA AGGAAATTTG TACAAGCACT TATAGATACA
GACTTAGAAC GAGGTGGAAT GGTAGTAAGC CTACTAGAAC GACGGTTGCT TAAAGATAAG
TTTTGGATTG CTGTTTTAGA TATGCGAGAG TTTACAGAGC CTGTACCTGT TTCGACATTT
TTACAGGCAA TAGAGGCAGA GACTCTGGTG GCGCCTCCCC CAAATCTTGA TATACATGGT
TATACAATTG TAGATAGTAT AAAATTAGTA TTAGAAGTCC CCCCGGCTGA ATATGTACGG
CTGTATGGAA GTACATCACA GCGTGCAGCA ATTTTTACAA AAGTAAGTAC GGGAAGATCG
CCGATGATAG CCATAAGATC TATGTCGTCT GTGTTAAGTA TAAAACCTTC TATAGTAATT
CTTCACGGAA TTAAACCAGA CGCGGTCGAT CCGTTGGCTG TCGAAATAGC TAAGAGAAGT
TACCTCCCAC TTGCAGCCAC AGATATAAGT ATTGAAAAAA TGATAGAAAG CTTAAGAATG
TTTAAGTAA
|
|---|
| Protein sequence | MMVVIMDYHH IGIYIAGDII MSENPGEAIK KWRLIFGLTQ TAVATKLNTS PSVISDYESG
RRKFPGSRFV RKFVQALIDT DLERGGMVVS LLERRLLKDK FWIAVLDMRE FTEPVPVSTF
LQAIEAETLV APPPNLDIHG YTIVDSIKLV LEVPPAEYVR LYGSTSQRAA IFTKVSTGRS
PMIAIRSMSS VLSIKPSIVI LHGIKPDAVD PLAVEIAKRS YLPLAATDIS IEKMIESLRM
FK
|
|---|
| |