Gene Pisl_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1660 
Symbol 
ID4618150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1508114 
End bp1509112 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content38% 
IMG OID639784743 
Producthypothetical protein 
Protein accessionYP_931155 
Protein GI119873148 
COG category[S] Function unknown 
COG ID[COG2237] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.521806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00549093 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGTATCC TTGTTCTCTA TGTTGATAGA GATGGAGACC TAAAGGGTAG GGGTTTCGTT 
ACGCCTGTAG TTGGAAGAGA TGAGGTCTTG CGATTGGGAA TTAGATATAT TTTAATGAAC
CCTGATGATT CAGATGCAAA TGCAATATTT GCAGCTGTAA AAATATATGA CAAATTATCA
TCAGAATACG GTGGGGAGAA TATAAATGTC GCAGTTGTAA GCGGATCTCC CGATCCCGCC
GTAGCTGATA TTGTAGTGTT AAGAGAGCTG GAACAAGTAC TTACATTGTT CGATGCAGAT
GCTATATATT TCGTCTCAGA CGGTCCTAGC GACGAAGCTG CAATTCCCGC AATACAGAGC
AAACGGCCTG TAATCTCTGT CCAGCGAATC GTGGTGAAAC AAGCCAGGGG CGTTGAAGAA
ACCGTTACAT TGTTTAGATA CTATCTAAAC AAGGCTTTAA AGGAACCTGA GTATAGACGG
TATACCGTGG GGATACCATC GTTTCTTCTT TTTATAACGT TGCTTGGAAC ATTATTTAAC
TTAGAAGTTG TTAAGGGTGT ACTGACTATA GTATTTCTAT TTTTTGCGTT TTTTGCTATG
CTCTACGGAT TTGGTATTTA TGACTTTCTA AGAGAAGTAC TCAAAAAGTT TGAAATAACA
TTTATAACAA CTGTAATTTC TCTGTTTACA ATAGTAGTAT ATATGCTATC TGTGTTTCTT
CACGTTATGT GGATACCTGA ATATGTTGTA TTAGTTATGT CAATACTACC ATTTGTCTCT
TATCTTACTG AGGCATACTT TATATATAGA AAGATAAAAT TTGGCGGAAT TGTCGCTGGT
GTAGCTACTG CCTCATTTTT CTATTTTCTA TTCCCGGTGC TTGTAAAGCC CTCTAAAGAC
TTAGCAGAGA CCCTTATAGC GGTGGCTTTA TTTATGGCCT CTACATTTAT TGTAATTGCA
ACTACTTATA TTTTGAAGCT GGTAATTCAA CGGAAGTGA
 
Protein sequence
MRILVLYVDR DGDLKGRGFV TPVVGRDEVL RLGIRYILMN PDDSDANAIF AAVKIYDKLS 
SEYGGENINV AVVSGSPDPA VADIVVLREL EQVLTLFDAD AIYFVSDGPS DEAAIPAIQS
KRPVISVQRI VVKQARGVEE TVTLFRYYLN KALKEPEYRR YTVGIPSFLL FITLLGTLFN
LEVVKGVLTI VFLFFAFFAM LYGFGIYDFL REVLKKFEIT FITTVISLFT IVVYMLSVFL
HVMWIPEYVV LVMSILPFVS YLTEAYFIYR KIKFGGIVAG VATASFFYFL FPVLVKPSKD
LAETLIAVAL FMASTFIVIA TTYILKLVIQ RK