Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1654 |
Symbol | |
ID | 4617851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1504006 |
End bp | 1504524 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639784737 |
Product | putative RNA-binding protein |
Protein accession | YP_931149 |
Protein GI | 119873142 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2016] Predicted RNA-binding protein (contains PUA domain) |
TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00738213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAACGCA CAAGGCTTAG CAACAGGGAG ATTAAAGAAT TGCGTGAGAC ATACAACTTT ATGACGTCTA TATTAGAGGA GGCAGATGTG GTAGAAGTGG CTCATGTATC TGAAAAACAA CATATCTATT TAGTAGATGG AGAGCCTCTA TTTTTAAAGG TCTCAGAGGG GGAGTTGGGG GTTTTTGTTG TCCCCACTCT CTATCTTATT CACAAATCTT CAAAGAATAG GCTTCTCCCT CAGTATCCCA AAGCCGTGGT AGATCAAGGT GCGGTTGTTC GCATAATAAA AGGCGCAGAT ATTATGCGCC CTGGGATAAA GAGCTTTGTT GGCGATTTTA ATAAGGGGGA TATTGTATTT GTAACAGACG AAAAAAACCG TGTGATTGCT ATATCAGTAG CCCTATATTC GAAGTCCGAA ATTGAACAGA TGCAAAAGGG TAAAGTCTTG ATAAACTTAC ATCACCTAGG TGATAAGATT TGGGAAATTT CCCTAAAGTT GGTCAAGGAA AAATCTTAG
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Protein sequence | MKRTRLSNRE IKELRETYNF MTSILEEADV VEVAHVSEKQ HIYLVDGEPL FLKVSEGELG VFVVPTLYLI HKSSKNRLLP QYPKAVVDQG AVVRIIKGAD IMRPGIKSFV GDFNKGDIVF VTDEKNRVIA ISVALYSKSE IEQMQKGKVL INLHHLGDKI WEISLKLVKE KS
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