Gene Pisl_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1608 
Symbol 
ID4618254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1461558 
End bp1462178 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID639784693 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_931105 
Protein GI119873098 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.130416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTAG AAAAAATCGT CACGGGGCCC TTAGCCACAA ATTCATACTT GGCGTGTAAA 
GACGATGTAT GCATAGTGAT AGATCCGGCA GACGCCGAGC CTATAATACA AGCGCTGAGA
CGGAGAGGCA TTGTCGCAGT GGTGGCGACG CATCTCCATT TTGACCATGC GGCTGGCGTT
AGACGCGTCG TAGAGTTATT TAACGCCCCT TTTTACGCTC ATCCAGCCGA CTGGGCCGTA
TATAGGGAGA TAAACGAGGT GGCACTTGAA TGGGGGTTTG AAATCCCAGA TATCCCAGAG
CCAAAGCCCA TCCCGGATAG ACTCTGGATT TTTGAAGTGT GGCACACGCC TGGACACACG
CCAGGGTCTA TAACTTTGGT AGCCGACGGC GTTGTGTTTA CCGGCGATAC GCTCTTCAAG
AGTTCTGTAG GTCGTACAGA CCTACCGCTG GGAGATTGGG ACGCTCTTGT ACAGTCTATA
TGTAGGCTTT ATACGCTCCC GAACTATTAC GTAGTATACC CAGGCCACGG CCCTAAGACT
GACATCGGCT CCGAGGCGTC TAAAAACCCC TTTATAAATA TCTCCATTTG TAAAAGTGGG
GTGCCCCGCA ATCCATATTA A
 
Protein sequence
MIVEKIVTGP LATNSYLACK DDVCIVIDPA DAEPIIQALR RRGIVAVVAT HLHFDHAAGV 
RRVVELFNAP FYAHPADWAV YREINEVALE WGFEIPDIPE PKPIPDRLWI FEVWHTPGHT
PGSITLVADG VVFTGDTLFK SSVGRTDLPL GDWDALVQSI CRLYTLPNYY VVYPGHGPKT
DIGSEASKNP FINISICKSG VPRNPY