Gene Pisl_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1593 
Symbol 
ID4616780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1449609 
End bp1450187 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID639784677 
Producthaloacid dehalogenase superfamily protein 
Protein accessionYP_931090 
Protein GI119873083 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2178] Predicted RNA-binding protein of the translin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAGAGA ACAAATCTTT ATACGACGAA TTAAGGCAAT ATGAACAAGC GAAAGACGAG 
GTAATACAGA CGTCGATTAA AGTTGCGCGG CTTTCTAAGG CTGTAGTCTA CTCCGTAATT
AGGAGAGATT TTGTCTCAGC AGAAAAAGCT ATACGTGAGA TGGAGAATGT TGTTGCCAAG
TTGAAGAAAT TAATTAACGA ATGGCCCATG TTTTATAATA ACGCCGCAAC TGGACTACAA
GAGTATGTTG AGGCAATCAC ATTGTACTTA TTCATTAAAG AGGGTAGGTT TCCCACTAAA
GAGGAGCTAG GCGTTGATGT ATATACATAC CTTATGGGTG TGGCAGACGT GGCAGGGGAG
TTGGGCAGAT CCGCTACGGA GGAGTTGTTA AAGAAAAACA TAGAGGGGGC GAAGAGACTT
AAAGACGCTG TAGAAAGCCT CTACCTCGAT CTCCTAGCGC TTGAGCCGCG TGATTATGAG
TTGCGGAAAA AAGTAGATTA TGTAGGCTCT CAAGCCAATT GGATTTCAGA AAAGCTATTT
TACGCTACTA CGTGTAGACA GACGAGCGAT GTCGAATAA
 
Protein sequence
MLENKSLYDE LRQYEQAKDE VIQTSIKVAR LSKAVVYSVI RRDFVSAEKA IREMENVVAK 
LKKLINEWPM FYNNAATGLQ EYVEAITLYL FIKEGRFPTK EELGVDVYTY LMGVADVAGE
LGRSATEELL KKNIEGAKRL KDAVESLYLD LLALEPRDYE LRKKVDYVGS QANWISEKLF
YATTCRQTSD VE