Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1589 |
Symbol | |
ID | 4617384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1446455 |
End bp | 1446901 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639784672 |
Product | 30S ribosomal protein S6e |
Protein accession | YP_931086 |
Protein GI | 119873079 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2125] Ribosomal protein S6E (S10) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.416866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACTT TCAAACTAGT GCTTTCAGAC CCCATCTCAG GCAAGGCCAG GCAGTTTGAG ATAAAAGACC CACTGGCACA ACGCTTCATA GGGCTTAAGA TAGGAGACGA ACTAGACGGC TCTGTGTTAA AAGACTTCCT AGAGTTGCCG AAAGGCGCTA AGATTAGAAT TACTGGCGGT AGTGGAATTG AGGGCGCGCC TATGCACCCC GGCGTGCCGG GACCTGTGAA AAGGTATATT CTAGCTGACG GGCCGCCGGG CTACTGGCCG CCGAAAAGAG GTATGCGAAA GAGGAAATTA GTGAGGGGCA ACACGATATC CGACTCTATT GTACAAATAA ACGCAGTAAT TGTATATCCA CAAGGCTATT CCGGACCCCC CGCCATACCG CTAGGAGCTA AGGAAATAGA AAAATTAACA AAAGCCAAAG AGGGGACACC GGCCTAA
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Protein sequence | MPTFKLVLSD PISGKARQFE IKDPLAQRFI GLKIGDELDG SVLKDFLELP KGAKIRITGG SGIEGAPMHP GVPGPVKRYI LADGPPGYWP PKRGMRKRKL VRGNTISDSI VQINAVIVYP QGYSGPPAIP LGAKEIEKLT KAKEGTPA
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