Gene Pisl_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1589 
Symbol 
ID4617384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1446455 
End bp1446901 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content50% 
IMG OID639784672 
Product30S ribosomal protein S6e 
Protein accessionYP_931086 
Protein GI119873079 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2125] Ribosomal protein S6E (S10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.416866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTT TCAAACTAGT GCTTTCAGAC CCCATCTCAG GCAAGGCCAG GCAGTTTGAG 
ATAAAAGACC CACTGGCACA ACGCTTCATA GGGCTTAAGA TAGGAGACGA ACTAGACGGC
TCTGTGTTAA AAGACTTCCT AGAGTTGCCG AAAGGCGCTA AGATTAGAAT TACTGGCGGT
AGTGGAATTG AGGGCGCGCC TATGCACCCC GGCGTGCCGG GACCTGTGAA AAGGTATATT
CTAGCTGACG GGCCGCCGGG CTACTGGCCG CCGAAAAGAG GTATGCGAAA GAGGAAATTA
GTGAGGGGCA ACACGATATC CGACTCTATT GTACAAATAA ACGCAGTAAT TGTATATCCA
CAAGGCTATT CCGGACCCCC CGCCATACCG CTAGGAGCTA AGGAAATAGA AAAATTAACA
AAAGCCAAAG AGGGGACACC GGCCTAA
 
Protein sequence
MPTFKLVLSD PISGKARQFE IKDPLAQRFI GLKIGDELDG SVLKDFLELP KGAKIRITGG 
SGIEGAPMHP GVPGPVKRYI LADGPPGYWP PKRGMRKRKL VRGNTISDSI VQINAVIVYP
QGYSGPPAIP LGAKEIEKLT KAKEGTPA