| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1544 |
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| Symbol | |
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| ID | 4618140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 1410159 |
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| End bp | 1411148 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639784627 |
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| Product | CRISPR-associated RAMP Csm3 family protein |
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| Protein accession | YP_931042 |
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| Protein GI | 119873035 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.352642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.26892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGTA AGATAATAAG GAAACTTCAG GGTATAGTGC TTATCTACGC AGAGATCGAG
ACGTTGAGCG GTCTTCTTAT CAGAACGCCA ATACACGCCC AGAGCTACAG AGTCGGCGGC
GCCGACATAT ACCCAATGGT GACAAGGAAA AAATACAGAT TTAACCAAGA TGCATGTAAC
GTCGAGGGGA GCGAGGAGGT TGAGTTAGAG GTTCCGTACA TACCTGGCTC TAGTCTCAAG
GGTAGGATGA GGTCGCTACT TGAGCTTGCC CACGGGCTAC CTCTCTACAC GACAGATAAC
AAAATCTGGC AACACGTCAG GTCGCTCAGC GCAATGCAGC TAGAAGACTT TCTGGATGAT
CTAGAAAACC GGTGCCTAAT TGACGAGCTC TTTGGATGGG CGGCGACCAG CTATAAACAG
GTAGATGAAA AAATAAAAGA AGTAAAAAAA GAGGATATCC GTAAAAAATT TGAAAACGCG
TGGAAAAACG CCGGCATTAC ACGTCTTCTT TTCGACGACT TCTTCCCAAC GTGTGAAACG
ATTAATAAGC TGGGGGGCAG GTTCGTAGGA ATTTCTGACT TCTTAGAGGA CAAATCCGAG
AATAGGATTG ATAGAGTGAC AGCTACGGCT GACCCGCGGA ACGTTGTCAG AGTTAAGCCT
GGCGTAGTTT TCTATGGGTA CATCAGGATG TTGCTGTTCG ACAACGACAG AGACATGGTC
AAAAAGTATC TCCAGACACT GCAAGCCGGC ATAGAATTGA TTGAAAACAC GTATCTAGGC
GCCTCGGGAA GCCGCGGATA CGGCCGTGTT GCCTTCAAAA ACTTTAATGT TGTGATACTA
AAAAGTGAGT GCGAGGTAAA GGATACGAAA CAAAAACCAA GTGAGTGCAA GATAAAAAAG
GAGGGGGAGC CTATTAAGAC GGATCGTATC GACGATGAAG AAAAAGTAGT TAAAGCTGTT
ATGCGCGTCT TTGAGCGAGG TAGTTTATGA
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| Protein sequence | MQSKIIRKLQ GIVLIYAEIE TLSGLLIRTP IHAQSYRVGG ADIYPMVTRK KYRFNQDACN
VEGSEEVELE VPYIPGSSLK GRMRSLLELA HGLPLYTTDN KIWQHVRSLS AMQLEDFLDD
LENRCLIDEL FGWAATSYKQ VDEKIKEVKK EDIRKKFENA WKNAGITRLL FDDFFPTCET
INKLGGRFVG ISDFLEDKSE NRIDRVTATA DPRNVVRVKP GVVFYGYIRM LLFDNDRDMV
KKYLQTLQAG IELIENTYLG ASGSRGYGRV AFKNFNVVIL KSECEVKDTK QKPSECKIKK
EGEPIKTDRI DDEEKVVKAV MRVFERGSL
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