Gene Pisl_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1502 
Symbol 
ID4617603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1370391 
End bp1371359 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content59% 
IMG OID639784585 
Producthypothetical protein 
Protein accessionYP_931001 
Protein GI119872994 
COG category[S] Function unknown 
COG ID[COG4641] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0246956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.685682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGATG GCCGAGAAGC CGTCAAGCTT CTGCTGATCG GCGCGAAAAG GCGTTTCAAC 
GCCGAATACT TCTACGCTAG AGCCTTCGCC GAGTTGGGCG CCTCTGTGGA CGTCGTTGAT
CAGTACGTGG GTCTGAGGAG GGGCGATTTG GCGCGTATTG TCCTTTCGAG AGTTGGCGTG
GGGGGCGAGC TTTTCAGGCG CCGCCTGCCG GTTAATCGCC TCGTCAGAGG CCTCCGTTTG
GGCGAGTACG ATGCGGTGGT TGTCTTCAAG GGGGAGTTTC TGGATAGGCG CGTGCTTGAG
CTTTTGTCTG AGTATAATGT CTGGCTTTTT TGGCCGGACA CGCTTAGGTA TCTGCCGCTT
CTAAGGGGGC GTCTCCAGTT CTTCAGGGGG GTGTTCGTGG CCACTGACCG CCACGACTTC
TTTTTCCGGC TGGGGGCGCG GAGGGTTGTC ACGGTCAGGT GGGCGTGCGA TCCGGAGGTG
CATAGGCCTG TGCCGGCCGA GAAGGTGTAT GACGTCTCTT TTGTTGGCAC CTTTTACTGG
CATAGGTGGC GTGTGTTGCG GCATCTCAGG AGGCGCCCTC ACGTCTTTGG CGGCTTCTGG
ATTCTGAAGG CTGGGGTGCA CCACCCGCCT GTGTATGGTG AGGACTATGC CAAGGTGGTA
TCGGCTACGA GGGTTAACCT CAACATTCAC CACCCGAGGG ATCTTGTGGC TGATGCGCCC
AACATGCGCA CTTTCGAGGT TGCGTGTATG GGCGGCTTTC TGCTTACGGA GGACATGCCG
AGCCTCAGGT CGCTGTTTAG CAGAGTGGCA ACGTATAGAG GAATCGACGA CCTGAACGAG
AAGGTGGAGT ACTACCTCTC AAACGACGCC GAGCGCGAGG AGGTGGCGGC GCGTATGCGG
GAGGAGGCTC TGGCGAGACA TACCTACCTC CACAGGGCGG AGGAGCTGAT GGGAGTCATC
TTGACCTGA
 
Protein sequence
MKDGREAVKL LLIGAKRRFN AEYFYARAFA ELGASVDVVD QYVGLRRGDL ARIVLSRVGV 
GGELFRRRLP VNRLVRGLRL GEYDAVVVFK GEFLDRRVLE LLSEYNVWLF WPDTLRYLPL
LRGRLQFFRG VFVATDRHDF FFRLGARRVV TVRWACDPEV HRPVPAEKVY DVSFVGTFYW
HRWRVLRHLR RRPHVFGGFW ILKAGVHHPP VYGEDYAKVV SATRVNLNIH HPRDLVADAP
NMRTFEVACM GGFLLTEDMP SLRSLFSRVA TYRGIDDLNE KVEYYLSNDA EREEVAARMR
EEALARHTYL HRAEELMGVI LT