Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1488 |
Symbol | |
ID | 4617773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1354975 |
End bp | 1355538 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639784571 |
Product | hypothetical protein |
Protein accession | YP_930987 |
Protein GI | 119872980 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00714419 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACACT TGGTGCTAGA CCACTCTGCA CTCATACCAT GCGGCGACAA GCCTGAAGAA GAGAAAAACG CAATACGGAA ACTCGGAGAG ACTCTCCCAC ACCTCGACGT CGTGTGGTAC ATGTCAAGAA AGTACATAAA GACAGCCTAC ACTGTCCTCG GAAGATCACT ACACGAGCCG CTACCAAAAC TACAATCCTC CATAAAAAGA GCGGCAAAAG AACTACTACA AGTGGCCGAC ACCAAAGCGC GGCACTGCAA ACAGAAGCCG CTGGAAGGGG TAAAGATAAA GTTGCATGTA ATCGCACGAA CAGCCGCGGA ACGCATCAAA CAAAGCCACC CACAGCTCTG GGGCAAGATA GACAGCCTAG TGGACGACGA CGATGACAAA GAAGTACTGG CAATCGCCGC CTTGGCAACC CACTGTACAC GTCACATATA CCTGGTGACA GCAGACACAC GCCTGCTACA CGCCGCAGAA AAAGTAGCAC AAGAGATCAA GGCCATAACC CCACGGGAGT TGCTCAACAT AGTAGAACAA GCCGGTCAGG ACAGAGACTC ATGA
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Protein sequence | MIHLVLDHSA LIPCGDKPEE EKNAIRKLGE TLPHLDVVWY MSRKYIKTAY TVLGRSLHEP LPKLQSSIKR AAKELLQVAD TKARHCKQKP LEGVKIKLHV IARTAAERIK QSHPQLWGKI DSLVDDDDDK EVLAIAALAT HCTRHIYLVT ADTRLLHAAE KVAQEIKAIT PRELLNIVEQ AGQDRDS
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