Gene Pisl_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1488 
Symbol 
ID4617773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1354975 
End bp1355538 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content51% 
IMG OID639784571 
Producthypothetical protein 
Protein accessionYP_930987 
Protein GI119872980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00714419 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACACT TGGTGCTAGA CCACTCTGCA CTCATACCAT GCGGCGACAA GCCTGAAGAA 
GAGAAAAACG CAATACGGAA ACTCGGAGAG ACTCTCCCAC ACCTCGACGT CGTGTGGTAC
ATGTCAAGAA AGTACATAAA GACAGCCTAC ACTGTCCTCG GAAGATCACT ACACGAGCCG
CTACCAAAAC TACAATCCTC CATAAAAAGA GCGGCAAAAG AACTACTACA AGTGGCCGAC
ACCAAAGCGC GGCACTGCAA ACAGAAGCCG CTGGAAGGGG TAAAGATAAA GTTGCATGTA
ATCGCACGAA CAGCCGCGGA ACGCATCAAA CAAAGCCACC CACAGCTCTG GGGCAAGATA
GACAGCCTAG TGGACGACGA CGATGACAAA GAAGTACTGG CAATCGCCGC CTTGGCAACC
CACTGTACAC GTCACATATA CCTGGTGACA GCAGACACAC GCCTGCTACA CGCCGCAGAA
AAAGTAGCAC AAGAGATCAA GGCCATAACC CCACGGGAGT TGCTCAACAT AGTAGAACAA
GCCGGTCAGG ACAGAGACTC ATGA
 
Protein sequence
MIHLVLDHSA LIPCGDKPEE EKNAIRKLGE TLPHLDVVWY MSRKYIKTAY TVLGRSLHEP 
LPKLQSSIKR AAKELLQVAD TKARHCKQKP LEGVKIKLHV IARTAAERIK QSHPQLWGKI
DSLVDDDDDK EVLAIAALAT HCTRHIYLVT ADTRLLHAAE KVAQEIKAIT PRELLNIVEQ
AGQDRDS