Gene Pisl_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1487 
Symbol 
ID4616421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1353944 
End bp1354975 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content56% 
IMG OID639784570 
Producthypothetical protein 
Protein accessionYP_930986 
Protein GI119872979 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.10218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTGG AGCTGTACGT CAAAAACTGG CGCTGTATAG AGGAGGCCAG AGTCTCCCTG 
AGGCCGGTGA CGGTTTTCAT CGGGGGGAAC TCCACCGGGA AGTCCAGCCT AGCCTACGCA
GCTTACTTCC TGGCAAAGAT CTCAGAACCG GAGTGGAGAG ACGTCAACAA GGTTCTGGCC
CAGCTATACG GCGTTAGCTT AGACGGCGTT GTTAGAAGCG ACGGAGCGAG GAGATTCTAC
CCGGTCATAG TCGAGGCCGG TGGAGCGCGC TTCGAGGCGC AGAGCCCAGA CAACGCGGCG
ACGCCAAACA CCAAGCCGTG GAGAGACCAC TATCTACTAC CCTCGCAGAG ACTCAGCTTC
TTAAGACTGT CGCAACTAAT CCCCAAGATA CGAGAAGCTA TGAGCAAACA CCCGGAGACT
CGGCCGTTTC TCGCACTCGC GTCAAGCCTC TTCGAGACTT TGAAGACAAT CCCCGTAATG
CCGCCGCTGT ACTTCTTCCT CGAAGACTTG ACAAAGCTCT ACCTCGGCAG AGGCTTCGTA
AGGCGCCGCG AGATGGGCAT AGGCACCTTA GTCGAGGAGG TGATGCCCCT GCTCAGCCTC
ATCGCCTACA GCTACGTGGA TCCCTTCATC ACGAAGCTCC AGCTACCCCT CGACCTGGCG
CCAGACGGCT TTGCAGACTC CGCCATAATC GAACAGTTCG TCGACGCGGC ACGCGAGGAC
AGCCTCCTAG TCATCGAAGA GCCCGAGATA CACAAGAACC CCATCACCAC CATAAACCTA
GTTAAACACA TCGCGGCCAG AGCGGTGGAG AAGAAGTTAA CAGTTGTGAT GACCACACAC
AGCGACATCG CCATAAAAGC CCTCCTCAAG GCCGTAGAGG ACAAAAGCCT CGAGACGCAA
CACGTGGCAG TGTACTACTT TGAGAGAAGC GCCGAAAACC CATGGACGAG AGTCAGAGAG
CTGCGCGTCT ACGAAGACGG GACAATAGAG GAGCTACCAG ACGTCGAACG AGTAGTCTCG
ATGCTGTTCT AA
 
Protein sequence
MDVELYVKNW RCIEEARVSL RPVTVFIGGN STGKSSLAYA AYFLAKISEP EWRDVNKVLA 
QLYGVSLDGV VRSDGARRFY PVIVEAGGAR FEAQSPDNAA TPNTKPWRDH YLLPSQRLSF
LRLSQLIPKI REAMSKHPET RPFLALASSL FETLKTIPVM PPLYFFLEDL TKLYLGRGFV
RRREMGIGTL VEEVMPLLSL IAYSYVDPFI TKLQLPLDLA PDGFADSAII EQFVDAARED
SLLVIEEPEI HKNPITTINL VKHIAARAVE KKLTVVMTTH SDIAIKALLK AVEDKSLETQ
HVAVYYFERS AENPWTRVRE LRVYEDGTIE ELPDVERVVS MLF