Gene Pisl_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1470 
Symbol 
ID4616767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1340318 
End bp1341088 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID639784553 
Producthypothetical protein 
Protein accessionYP_930969 
Protein GI119872962 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCGG CCTGGCTATA CGCCGCCTCG GCGATCTCGG GGGCGGCAGT GGGCTTCGTC 
CTGGGGGTCA TCGGAGGGGG CGGCTCCATC TTAGCCATAC CCCTTCTCCT CTACTTCGCG
GGGCTGGCCA CGTTGACTGA CCTCAACACA GCCGTCCACC TTGCCGTCGG CTCCACGGCC
CTGGCGGTGG GCGCCAACGC CCTAGCCAAC TTCCTCATGC ACTGGCGCAG GGGCAACGTA
TCGCCGAGGG GAGCCGCCGT CTTCTCCGCC GCCGGCGTTC CAGCCGCCTG GGCAGGCGCG
TGGCTAGGCA AAGCCACCCG CGGCGAGGTC CTCCTCGCCG CCCTCGGCGC CGCCATGGTA
GCCCTCTCCA TCTGGGTCTT AAAACGCAGA GCCGCCGGAG GCCGGCAGCT AAACCTCGCG
AAGGCCGGGG CAGGAGGCGC GGCCGTCGGC TTCCTCTCCG GCTTCCTCGG AATCGGCGGA
GGCTTCCTAG TGGCGCCGGC GCTCATGTGG GCAGGCCTAG ACGTCAAGAG GGCAGTCGGC
ACCTCCCTAG CCGCTGTTGC CGCCTTCGGC TTAACCACCG CCGCCGAATA CGCCACAAGC
GGCTACCTAG ACCCCCTCAT CTCCCTAGCC TACCTCGCGG GAGGAGTGGC AGGGGGAGCA
GCAGGCGTGG CAATAGCCGC CAAAGCCCCC CGCGAAAAAA TCGCAATAGC CTACGCCGCA
GTCCTAGCCG CAGTAGGGAT ATACACAATA ATCAAGGCAC TAAAACCATA A
 
Protein sequence
MWPAWLYAAS AISGAAVGFV LGVIGGGGSI LAIPLLLYFA GLATLTDLNT AVHLAVGSTA 
LAVGANALAN FLMHWRRGNV SPRGAAVFSA AGVPAAWAGA WLGKATRGEV LLAALGAAMV
ALSIWVLKRR AAGGRQLNLA KAGAGGAAVG FLSGFLGIGG GFLVAPALMW AGLDVKRAVG
TSLAAVAAFG LTTAAEYATS GYLDPLISLA YLAGGVAGGA AGVAIAAKAP REKIAIAYAA
VLAAVGIYTI IKALKP