| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1447 |
|---|
| Symbol | |
|---|
| ID | 4618022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1319556 |
|---|
| End bp | 1320887 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639784531 |
|---|
| Product | transposase, IS605 OrfB |
|---|
| Protein accession | YP_930947 |
|---|
| Protein GI | 119872940 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.303185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.469752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTTT TGGCCTGCCC CCATGTGCCC TCCATAACCA ACAGATATTT CAGCCCATCC
ACATACAAGG CCATGTACGT ATACAGAACG TTAAAGATAG AAATCCCCTG GCAGTTGGTA
GAAGAGAGGC CGGACGTCCT CGGCCTCGCC GTAAGGATGC ACCTAGCGGT GGAGGAGTAC
GTCAGAAGGT TGTTAAAGGA GTTGACGGGG CAAGAGGAGC CGAAGCTGAC TACGGAGGAG
TTGGACAGAC ACCTCACGCC AGACAGGCGT GAGTTGGCAC ACCGGATAAT CGAGGAGACG
TTCCCCAAGT ACGGTCTTAG GAAGTATTTC GCAAATCAAG CCAAAGTGTT TTGGCGCGAT
GTCGTGTTCC ACAGGGCGGT TCCGTTAAAC GCCCAGCTTA GAGTTGAGGA CGAGAGAGAC
GTCGGCAGGG CAGTCTTCGT CGACCTAAAG AGCGGCGTTC TCAGAGTGCG GAAGTTGGGC
ATACCGCCGT TTGTTGTAAA ATTGAAGAAG GGCAGCATCT CTTGGATAAG AGAGAGACTA
CAGGAGGGCG CCGAGCTTAA GTTGGCGTTC CTCGGCGTTG ACGTAAGGAG GGGCAAGGAT
CCTACTTACG GCGGTTTATA TGTCGCTCTC GTCTTCGCTA GAGAGGTGAC GCAGATAGAG
CCTAGGGCGC TTGTCGTTGT TGACGTCAAC CGGTTGGACC ACTACATAAA AGTTGGTCTC
GTGGTCGACG GTCGTGTCGT GGAGCTATTG AAGTTCCCCA AGAGGGGGCG GGTTCAGAAA
CTGGAGAGGA TCCACGTCCA CATAAGACAG CTGAGTAGAG CTTTGGCTAA GGTAGACGAG
GACAGAGACC CGCGTAGAGC GTTAGACCTC CAGAGACAGC TGTGGAAGCT TAAGACGAAG
CGCTATGGCA TAATCCGAGA CATCGTTATA AACGCTACGC GTGAGATTAT AAAGCTGGCC
AGAGAACACC AAGCCGCGAT CGCGTTGGAC ACGATGGAAG ACGACACCTA CCGGGAGCTG
AAGGAGAGGA ACGGAGACGG AGTGAAGAAG CACCTCCTAG ACGGTTTGGG ACAACTAAGG
AAGCGCCTAC AGGCGCTCGC GCAGTGGTAC GGACTGCCGT ATTTGGAGGA GCGACTGTAT
TCGACCATCT GCCCCAAATG CAACGCTAAG ATGGTTGAGG AAAACGGCCG CTTCATGCGC
TGTCCCGCCT GCGGCTTCAA GGCACATAGA GACAACGTGC CGGTGATATG GGCAGAAAAA
CGCTACTGGG AAATCCTCCA GAAAACAAAA CAACCCACTT TTTCGGCGGC CGTCACATTT
TTAACCTCGT AA
|
|---|
| Protein sequence | MKLLACPHVP SITNRYFSPS TYKAMYVYRT LKIEIPWQLV EERPDVLGLA VRMHLAVEEY
VRRLLKELTG QEEPKLTTEE LDRHLTPDRR ELAHRIIEET FPKYGLRKYF ANQAKVFWRD
VVFHRAVPLN AQLRVEDERD VGRAVFVDLK SGVLRVRKLG IPPFVVKLKK GSISWIRERL
QEGAELKLAF LGVDVRRGKD PTYGGLYVAL VFAREVTQIE PRALVVVDVN RLDHYIKVGL
VVDGRVVELL KFPKRGRVQK LERIHVHIRQ LSRALAKVDE DRDPRRALDL QRQLWKLKTK
RYGIIRDIVI NATREIIKLA REHQAAIALD TMEDDTYREL KERNGDGVKK HLLDGLGQLR
KRLQALAQWY GLPYLEERLY STICPKCNAK MVEENGRFMR CPACGFKAHR DNVPVIWAEK
RYWEILQKTK QPTFSAAVTF LTS
|
|---|
| |