Gene Pisl_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1445 
Symbol 
ID4617684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1317154 
End bp1317939 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID639784529 
Producthypothetical protein 
Protein accessionYP_930945 
Protein GI119872938 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.154622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCTCTG TCTTAAAGAT ATTGGCCGCT GCGTTCCTCT GGTCTACAAT TGGTGTTGCC 
GCGTCGCTGG GGAGAGAATA CCTCTGGATA GCCTTCATCC GGTCGCTTAC TGCAGCCTTG
ACGGCGCTTG CGGCTGGGGC TAGGCCGGGA AGGGGGGCGC TTCTGCCAGG CCTCCTCCTG
GGCGGCCTCT TCTCGGCGTA TCCAGTGGCG GCTATATACG CGGGGGTTGG GAACGCCGCG
TACCTCCTCT ACACAGCCCC CCTGTGGACA ACCCTGGCCC TCGCCCTTTG GGGCGAGAGG
CCATCCAGAC GTGACGTCAG TGGCGTAGCC CTTGTCCTTG TGGCAGTGGT GCTTATGGCC
TCTTCCGGCA GAATTTCGAC TGTCGGCTTC GCCGCGGGCC TTGCCTCGGG TTTCTTCTAC
GGCTTGTACA TCGCTGTTGC CAGGAGGCTG GCGTCGGGAG GCCGCGTGGT GGACGCGTCG
CTTGGGGCTA TGCCCTATAC GCTGGCGGTG ACCGCCCCCG CACTTCTGCT GAAGCCCGGC
CCGCCTACGC CAGAGGCGGT CGCCGCGGGG GTATACCTCG GCGTGTTTGG GACGGTGTTG
CCATACAGAC TCTTCGCCTC TGCCGTCTCT ACAGTCGGGG GGGCCAGGGC GTCTGTGTTA
GCCTCTCTAG AGCCTGTACT TGCAGCCCTC TGGGGGGTTC TACTTTTTAG CCAAGTGCCT
ACCTCTCTTG AGGCAGTGGC ATATGTCTTA ATCACCGCGG CCGCCGTAGT GGCGTCGCGT
AAGTGA
 
Protein sequence
MGSVLKILAA AFLWSTIGVA ASLGREYLWI AFIRSLTAAL TALAAGARPG RGALLPGLLL 
GGLFSAYPVA AIYAGVGNAA YLLYTAPLWT TLALALWGER PSRRDVSGVA LVLVAVVLMA
SSGRISTVGF AAGLASGFFY GLYIAVARRL ASGGRVVDAS LGAMPYTLAV TAPALLLKPG
PPTPEAVAAG VYLGVFGTVL PYRLFASAVS TVGGARASVL ASLEPVLAAL WGVLLFSQVP
TSLEAVAYVL ITAAAVVASR K