Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1445 |
Symbol | |
ID | 4617684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1317154 |
End bp | 1317939 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639784529 |
Product | hypothetical protein |
Protein accession | YP_930945 |
Protein GI | 119872938 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.154622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCTCTG TCTTAAAGAT ATTGGCCGCT GCGTTCCTCT GGTCTACAAT TGGTGTTGCC GCGTCGCTGG GGAGAGAATA CCTCTGGATA GCCTTCATCC GGTCGCTTAC TGCAGCCTTG ACGGCGCTTG CGGCTGGGGC TAGGCCGGGA AGGGGGGCGC TTCTGCCAGG CCTCCTCCTG GGCGGCCTCT TCTCGGCGTA TCCAGTGGCG GCTATATACG CGGGGGTTGG GAACGCCGCG TACCTCCTCT ACACAGCCCC CCTGTGGACA ACCCTGGCCC TCGCCCTTTG GGGCGAGAGG CCATCCAGAC GTGACGTCAG TGGCGTAGCC CTTGTCCTTG TGGCAGTGGT GCTTATGGCC TCTTCCGGCA GAATTTCGAC TGTCGGCTTC GCCGCGGGCC TTGCCTCGGG TTTCTTCTAC GGCTTGTACA TCGCTGTTGC CAGGAGGCTG GCGTCGGGAG GCCGCGTGGT GGACGCGTCG CTTGGGGCTA TGCCCTATAC GCTGGCGGTG ACCGCCCCCG CACTTCTGCT GAAGCCCGGC CCGCCTACGC CAGAGGCGGT CGCCGCGGGG GTATACCTCG GCGTGTTTGG GACGGTGTTG CCATACAGAC TCTTCGCCTC TGCCGTCTCT ACAGTCGGGG GGGCCAGGGC GTCTGTGTTA GCCTCTCTAG AGCCTGTACT TGCAGCCCTC TGGGGGGTTC TACTTTTTAG CCAAGTGCCT ACCTCTCTTG AGGCAGTGGC ATATGTCTTA ATCACCGCGG CCGCCGTAGT GGCGTCGCGT AAGTGA
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Protein sequence | MGSVLKILAA AFLWSTIGVA ASLGREYLWI AFIRSLTAAL TALAAGARPG RGALLPGLLL GGLFSAYPVA AIYAGVGNAA YLLYTAPLWT TLALALWGER PSRRDVSGVA LVLVAVVLMA SSGRISTVGF AAGLASGFFY GLYIAVARRL ASGGRVVDAS LGAMPYTLAV TAPALLLKPG PPTPEAVAAG VYLGVFGTVL PYRLFASAVS TVGGARASVL ASLEPVLAAL WGVLLFSQVP TSLEAVAYVL ITAAAVVASR K
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