| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1444 |
|---|
| Symbol | |
|---|
| ID | 4617210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1316325 |
|---|
| End bp | 1317128 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639784528 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_930944 |
|---|
| Protein GI | 119872937 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2107] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.111813 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAG TGGCTCATTC TCCAGATGCA GACGACGCCT ATATGTTTTA CGGCATAGCG
TCAGGCGCTG TAAAACTGCC GGTTCCCCAC GTGGAGTTTC TAGCAGATAT AGAGACTTTG
AATAAACTCG CTGTCGAAGA GTTACTTGAC GTATCTGCTA TTAGTGTACA CGCCTATGCC
TATATCTGCA ATAGGTACTA CATAATGCGA GTAGGCGCCT CCATGGGCGA GGGGTATGGG
CCTGTGGTAG TGGCGAGGCC GGGGGTAGAT AGGCCTAGGC ATGTGGCTGT GCCAGGGCGT
TGTACAACCG CCGCCCTACT CCTCAAGTTA GCAATGCCGG AGGTTAAAGC CGTGGAAATG
CCCTTTGATA AAATATTAGA CGCTGTTATA GCCGGCGTAG TTGACGCAGG AGTTTTAATC
CACGAGGGGC AAATCACCTA CAGTAGATTT GGCTTGAAAA AACTGACAGA CCTCGGCGAG
TGGTGGCTGA GAGAGACCGG CTTACCGACG CCTCTTGGAG TAGACGTAGT TAAAAAGAGC
TTGGGTAGAG AACTTGCAGA GGCTTTAACA CAAGCTCTCC GCGAGTCTAT TAGATACGCC
GATACACATA GAGAAGAGGC ACTTAAGTAC GCCCAGAGGT TTTCAAGAGG ACTCACCCTA
GAGGAGACAG CCCGTTTTGT AGACATGTAC GTCAACGCCT ATACGAGGGA CCTCGGCGCG
AGGGGAGAGA AGGCAATAAA CGAACTTTTA ACACGGGCTT CTGAAAGAGG CTTAACGCCA
AGTTGTACGC CCGAGTATAT ATAA
|
|---|
| Protein sequence | MIKVAHSPDA DDAYMFYGIA SGAVKLPVPH VEFLADIETL NKLAVEELLD VSAISVHAYA
YICNRYYIMR VGASMGEGYG PVVVARPGVD RPRHVAVPGR CTTAALLLKL AMPEVKAVEM
PFDKILDAVI AGVVDAGVLI HEGQITYSRF GLKKLTDLGE WWLRETGLPT PLGVDVVKKS
LGRELAEALT QALRESIRYA DTHREEALKY AQRFSRGLTL EETARFVDMY VNAYTRDLGA
RGEKAINELL TRASERGLTP SCTPEYI
|
|---|
| |