Gene Pisl_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1440 
Symbol 
ID4616681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1309680 
End bp1310504 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content57% 
IMG OID639784524 
Producthypothetical protein 
Protein accessionYP_930940 
Protein GI119872933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0416786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00780704 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATCCTC TCGGCGTTAT TGCGGCGTTT ACAGCCGCCG TAATTTGGGC TCTCGTCATA 
TTTCTATACA AACAGAAGAT GGAGACGGCG GAGGCAACCG TGGTCAACTT CTCTAGGCTT
GTATATGTGT CGGCTTTTAT GTGGCCTGTC CTCCTCCTCG CCGAGCCAAC CCCCGGCCTT
TGGGCCGCCG TAGCCAGCGG CCTCATCACC CTGGTGGTGG GAGACAGTCT CTACTTCTAT
GCAATACATA GAGTCGGAGG GTCTGTCGCA GCGCCGCTGG TCTACACCTA TGTTGTAATT
GCTCAATATT TCGCCCTCCT GTTGGGGGAG ACAGTCTCCC ACTGGCTTGC CGCCTCGGCA
ATCCTCACTG TAGCCGGCGT CGCTCTCTTA GCCAGAGGTG GTGTAGCCCG GCTGGAACCC
CTCGGCATAG CGGCAGCCCT AGCCGCAGCT CTCATGTGGT CTCTAGGTAT GGCCGCCGTG
AAGCTAGCGA CCATGGGCCA GGTACACCCT GCGGTAATAG CATACCTCAG AGCTCTCTCT
GCCTGCGCCG CCCTGGGGAT ATACCTAGTC GCGAGACGCC GCCTATCTCT TGTAAAATCT
CCTCTCTTTG CCATCGCCTC CCTCTTAGAC CTAGGCCTCG GCTCCGCCCT ATTTGCTTAC
TCAGTCGACA AGATAGGCCT CGCCACAACT ACAATACTCG TCTCGACATC CCCCTTAATA
GTCCAAATCT ACGCGAGAGC CACAGGCGCC GAGAGGATCG GCCCTAGACA AACGGCGGGA
GCCCTCTCCA TCTTCCTCGC CATATATCTA GCGCTCAGAG GTTAG
 
Protein sequence
MDPLGVIAAF TAAVIWALVI FLYKQKMETA EATVVNFSRL VYVSAFMWPV LLLAEPTPGL 
WAAVASGLIT LVVGDSLYFY AIHRVGGSVA APLVYTYVVI AQYFALLLGE TVSHWLAASA
ILTVAGVALL ARGGVARLEP LGIAAALAAA LMWSLGMAAV KLATMGQVHP AVIAYLRALS
ACAALGIYLV ARRRLSLVKS PLFAIASLLD LGLGSALFAY SVDKIGLATT TILVSTSPLI
VQIYARATGA ERIGPRQTAG ALSIFLAIYL ALRG