Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1440 |
Symbol | |
ID | 4616681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1309680 |
End bp | 1310504 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639784524 |
Product | hypothetical protein |
Protein accession | YP_930940 |
Protein GI | 119872933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0416786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00780704 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATCCTC TCGGCGTTAT TGCGGCGTTT ACAGCCGCCG TAATTTGGGC TCTCGTCATA TTTCTATACA AACAGAAGAT GGAGACGGCG GAGGCAACCG TGGTCAACTT CTCTAGGCTT GTATATGTGT CGGCTTTTAT GTGGCCTGTC CTCCTCCTCG CCGAGCCAAC CCCCGGCCTT TGGGCCGCCG TAGCCAGCGG CCTCATCACC CTGGTGGTGG GAGACAGTCT CTACTTCTAT GCAATACATA GAGTCGGAGG GTCTGTCGCA GCGCCGCTGG TCTACACCTA TGTTGTAATT GCTCAATATT TCGCCCTCCT GTTGGGGGAG ACAGTCTCCC ACTGGCTTGC CGCCTCGGCA ATCCTCACTG TAGCCGGCGT CGCTCTCTTA GCCAGAGGTG GTGTAGCCCG GCTGGAACCC CTCGGCATAG CGGCAGCCCT AGCCGCAGCT CTCATGTGGT CTCTAGGTAT GGCCGCCGTG AAGCTAGCGA CCATGGGCCA GGTACACCCT GCGGTAATAG CATACCTCAG AGCTCTCTCT GCCTGCGCCG CCCTGGGGAT ATACCTAGTC GCGAGACGCC GCCTATCTCT TGTAAAATCT CCTCTCTTTG CCATCGCCTC CCTCTTAGAC CTAGGCCTCG GCTCCGCCCT ATTTGCTTAC TCAGTCGACA AGATAGGCCT CGCCACAACT ACAATACTCG TCTCGACATC CCCCTTAATA GTCCAAATCT ACGCGAGAGC CACAGGCGCC GAGAGGATCG GCCCTAGACA AACGGCGGGA GCCCTCTCCA TCTTCCTCGC CATATATCTA GCGCTCAGAG GTTAG
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Protein sequence | MDPLGVIAAF TAAVIWALVI FLYKQKMETA EATVVNFSRL VYVSAFMWPV LLLAEPTPGL WAAVASGLIT LVVGDSLYFY AIHRVGGSVA APLVYTYVVI AQYFALLLGE TVSHWLAASA ILTVAGVALL ARGGVARLEP LGIAAALAAA LMWSLGMAAV KLATMGQVHP AVIAYLRALS ACAALGIYLV ARRRLSLVKS PLFAIASLLD LGLGSALFAY SVDKIGLATT TILVSTSPLI VQIYARATGA ERIGPRQTAG ALSIFLAIYL ALRG
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