Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1434 |
Symbol | |
ID | 4616765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1300952 |
End bp | 1302940 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639784518 |
Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
Protein accession | YP_930934 |
Protein GI | 119872927 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0508311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0451179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAG TTGCAGTAAT CGGGGCTGGC ACAATGGGCC ACGGCATTGC TGAACTTTTT GCTATGGCGG GTTACGAAGT GGCGCTTGTA GATGTTGCTG ACGAATACCT AAAGCGCGCG CTCCAAAATA TAGAGTGGTC TCTTAAGAAG CTAGCAGAGA AGGGCCAGTT GAAGGAAGAC CCCTCGGCTG TGCTCTCTCG TATTAGGCCT GTTGTTGGTG ATGTGTGTAG TGCGGTTGTT GGTGTTGAGC TTATGGTTGA GGCTGTGGTA GAGGATATTG AAGTTAAGAA GAGAGTTTTT GCCGAAGCTG ACCGTTGCGC GCCGCCAGAG GCAATACTAG CCACAAACAC ATCTTCACTA CCAATAACAG AAATCGCAGA AGCAGTAAAA CCAGAGAGAA AAACAAAAGT CGTAGGAATG CACTTCTTCA ACCCACCAGT ACTAATGCCG CTAGTAGAAG TGATCAAAGG GCAATACACC AGTGACGAAA CTGTAAAGAA GGTGGCAGAA TACGCGCAGA AGCTTGGTAA ACAAACTGTA GTGGTAAATA GAGACGTCCC TGGTTTTATA GTAAATAGAA TACTAGCGAG AGTAAACGAG GCGGCGTGTT GGATGGTTGC CCGTGGCGAG GCTACAATAC AGGAGGTGGA CTCTGCGTTG ATATATAAGG CTGGGCTTCC CATGGGCGCC TTTATTCTTA TGGATTACAC AGGGATTGAT GTAATCTGTT TCATAGGCGA CGCCATGTTA AAACGTGGTT TCAAATCTCA TCCATGTCCA CTTATTCTTG AGAAGTGTCA ACAGAAGAAG TATGGCGTTA AGTCGGGAGA GGGCTTTTAT AAATATCCAG CCCCAGGCAA GTTCCAATGG CCCGAGGTGC CGAAATCAGC AGGCGATAGA ATAGATATAG TATATATACT CGCTCCCGCC ATAAATGAGG CTGCTTATCT TCTTAGAGAG GGTATTGCTA CGAGAGAGGA TATTGACAAG GCTGTGAGAC TTGGCTTAAA CTGGCCTAAA GGGCCTCTAG AATATGCAGA CGAAATAGGA ATAGACACAA TAGTCAAGAC GCTAGAAGAG TGGAGACAGA AGACGGGATT TGAGGAGTAC GAGCCAGACC CGTTGTTGAA AGAAATGGCC GCCAAGGGTA AGCTTGGTAA GAAGACTGGG GAGGGCTTCT ATACATATGT GAAGGCTGAA GAGAAGAAAT TAGAGACTCT CATCGTGAGA TACGAGCCCG GCATCGCCTG GATTATTCTC AATAGGCCTG AACGCCTCAA CGCCATAAAC CCAAAAATGA TCGAAGAGCT GTGGAAAGTT CTTGACGAAA TTGAACAGAT GGATTACGAC AAGGTGAGAG TTGTAATTAT CACAGGCGCT GGGAGGGCCT TCTCCGCCGG CGCAGACGTC ACAAGTTTTA TGGGCGCCAC GCCTATAACA ATATTCAAAA TATCTCGGAA GTTACAAATG CTCTTTGAGA GAATAGAGCT TTTAGACAGG CCGGTAATAT GTGGCTTAAA TGGGTATACC CTAGGCGGAG GTCTAGAGCT TGCTATGTCT TGTGATTTTA GAATAGCGGC TGAAACAGCA GAGTTAGGCC AGCCAGAGAT AAACCTTGGG TTTATCCCAG GCGCCGGGGG AACGCAGAGA TTGCCCAGGC TAATTGGGAG AGATAGAGCT AAGGAGCTTA TATTCACCGG CGATAGAATT CCGGCGAGAG AGGCAGAGAG ACTAGGCCTT GTAAATAAAG TGGTGCCGCC GGACAAACTA GAACAAGAAC TCAGGGCGTT TGCCAACAAG CTTGCTGAAA AACCGCCTCT CGCCCTCGCC ATGGCGAAAT ATGCAATAAA CTTCGGCATC GAAGTCCCAA TATGGGCCGC GACGTTGCTA GAGGCTACAC AATTTGGCAT ACTATTCAGC ACAGAAGACG TCATAGAAGG CGTTTCTTCA TTTCTACAGA AGAAAAAGCC ACAGTTTAAA GGCCGGTAG
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Protein sequence | MPKVAVIGAG TMGHGIAELF AMAGYEVALV DVADEYLKRA LQNIEWSLKK LAEKGQLKED PSAVLSRIRP VVGDVCSAVV GVELMVEAVV EDIEVKKRVF AEADRCAPPE AILATNTSSL PITEIAEAVK PERKTKVVGM HFFNPPVLMP LVEVIKGQYT SDETVKKVAE YAQKLGKQTV VVNRDVPGFI VNRILARVNE AACWMVARGE ATIQEVDSAL IYKAGLPMGA FILMDYTGID VICFIGDAML KRGFKSHPCP LILEKCQQKK YGVKSGEGFY KYPAPGKFQW PEVPKSAGDR IDIVYILAPA INEAAYLLRE GIATREDIDK AVRLGLNWPK GPLEYADEIG IDTIVKTLEE WRQKTGFEEY EPDPLLKEMA AKGKLGKKTG EGFYTYVKAE EKKLETLIVR YEPGIAWIIL NRPERLNAIN PKMIEELWKV LDEIEQMDYD KVRVVIITGA GRAFSAGADV TSFMGATPIT IFKISRKLQM LFERIELLDR PVICGLNGYT LGGGLELAMS CDFRIAAETA ELGQPEINLG FIPGAGGTQR LPRLIGRDRA KELIFTGDRI PAREAERLGL VNKVVPPDKL EQELRAFANK LAEKPPLALA MAKYAINFGI EVPIWAATLL EATQFGILFS TEDVIEGVSS FLQKKKPQFK GR
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