Gene Pisl_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1429 
Symbol 
ID4618017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1295960 
End bp1296490 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content57% 
IMG OID639784513 
ProductNUDIX hydrolase 
Protein accessionYP_930929 
Protein GI119872922 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.742876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0486947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAGG TGATCTATAG GGGGAGGAAG TTTGTGCTTG TGAAAAGGGC TAGGCGGGTC 
GGCGGCCGCA TTGTATGGGG CGAGTACCTC GTCCACCCGG GGGCGGTCGC GGTGTTGGCT
ATCGACGGCG GCAAGGTGCT GTTAGTTAAA CAGTTCCGGG GGGCGTTGGG CCAGTGGACG
CTGGAGGTGC CCGCGGGGAC GCTGGAGCTG GGGGAAGACC CGCTAGAGGC CGCCGTGAGA
GAAATGATAG AGGAAACTGG CTACAGACCG CTGAAGTTAG AACACCTAAT AGACTTCTAC
CCAACACCAG GCGTGTCTAA CGAGCTGATA AAAATCTACT ACACAAACGC CCTAGAGTAC
GTCGGCGTCG GCGCACGCGA CCCAGGGGAG GTAGATATGG AAGTTGTAAA AGTGGAACCA
ATCGAGCTAT TGCGTATGAT AGACGGCGGA GAGATAAAAG ACGGGAAGAC AATAGTTGCG
GCACTCACCG CCTGGAGAAG AGGGCTACTC CACTCTGACT CCCCTTTGTG A
 
Protein sequence
MEEVIYRGRK FVLVKRARRV GGRIVWGEYL VHPGAVAVLA IDGGKVLLVK QFRGALGQWT 
LEVPAGTLEL GEDPLEAAVR EMIEETGYRP LKLEHLIDFY PTPGVSNELI KIYYTNALEY
VGVGARDPGE VDMEVVKVEP IELLRMIDGG EIKDGKTIVA ALTAWRRGLL HSDSPL