Gene Pisl_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1420 
Symbol 
ID4617269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1289584 
End bp1290315 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID639784505 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_930921 
Protein GI119872914 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.437364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG ACGTAAAACA GGCTATCAGA GAGCGCATAT GGCGTCTCCT AGAGGAGAGA 
GACATCGCCG CGTTCCCCCG GCCTGTCTAC GGCAGAATAC CAAACTTCAG AGGGGCAGAC
ATAGCTTGCC AAAACCTAAC GCGCCTCAGC CAGTTTATCA ACGCCGCCGT CGTGAAGATA
AACCCAGACG CGCCGCAGAG GCCCTGCCGT GAGGCGGCCC TCTCCGCCGG CAAAACAGTA
ATAATGCCGA CGCCAAGGAT AAGAGAGGGC TTCTTACTCC TCGAACCACG TTCTATACCG
CGGGAGGCGT ATAGAGAGGC TTCGACAATC GCCGGCGCCT TTAAATGGGG GAAGTCTGTA
AAGCCTTGGC ATCTGCCAAG AGTAGACCTA GTCATAATTG GGTCTGTCGC AGTTAACCCA
AAGACAGGCA GGAGACTAGG CAAATCTCAC GGCTATGCAG AAATCGAGTG GGGGATATTG
TCTACCTTTG GCAAAGTGGG CGAAGAGACT CCAGTCGTCA CCACTGTACA CGACGTACAA
TTGGTAGAAG ACGACATACC TAAAGAGCCC TTTGACTTGC CTATAGATAT TATAGCGACG
CCTACAAAAA TTATCTTCGT CAAGAGAGTC GACCCGAAGC CCCACGGCAT CTATTGGGAC
TATGTTACAG AAGAGATGTT GAGAGAAATC TCACTGCTCT CTGAAATACG TAGAAAAAAC
GTTTTTATCT AG
 
Protein sequence
MAKDVKQAIR ERIWRLLEER DIAAFPRPVY GRIPNFRGAD IACQNLTRLS QFINAAVVKI 
NPDAPQRPCR EAALSAGKTV IMPTPRIREG FLLLEPRSIP REAYREASTI AGAFKWGKSV
KPWHLPRVDL VIIGSVAVNP KTGRRLGKSH GYAEIEWGIL STFGKVGEET PVVTTVHDVQ
LVEDDIPKEP FDLPIDIIAT PTKIIFVKRV DPKPHGIYWD YVTEEMLREI SLLSEIRRKN
VFI