Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1419 |
Symbol | |
ID | 4618236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 1288215 |
End bp | 1289567 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639784504 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_930920 |
Protein GI | 119872913 |
COG category | [H] Coenzyme transport and metabolism [S] Function unknown |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [COG1992] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.528826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTGGA AAGTCGCAAT GACCATAGCA GGCCTAGACT CAGGAGGCGG CGCGGGGATA CACGCAGACA TAAAGACCTT CGCAGCGATG GGCGTCCACG GCACCACGGC GCTGACTTGT GTAACCGCCC AAAACACCTA CGAGGTCAGG GAGGCCCAGT GCCTCCAGCC GCCGCTCGTG AGGGCGCAGA TACTGGCGGT TTGGGACGAC ATGGGCATAG ACGCGGGCAA GACCGGAATG CTAGGGACGA GAGAAATAAT CGAGGAGGTG GCCGCCACGG TCTCCAAGCT GGGCTTCCCC CTGGTGGTGG ACCCCGTAAT GATCGCGAAG TCGGGCGCCC CGCTGATATC TGAAGACGCC GTAGACACCC TAAAGAAGAG GTTGCTCCCA GTGGCGAAGG TAGTCACGCC CAATAGACAC GAGGCGGAGA AGCTAACTGG CATAAAGATA ACCAGCGTCG CGGAGGCGAG GAGAGCCGCG GAGGTCATAC ACAGGGAGTT CGGCACAGAA GTGGTGGTGG TCAAGGGAGG CCACTTAGAC GCCCCGGAGG CCGTCGACGT GGTGTACATA GGCGGCACCT TCCACGAGTT GGCGACCCCC CGCCTAGACT CGCGGGCGAC CCACGGAACC GGCTGCTCCT ACTCTGCCGC CATAGCCGCG GGGCTCGCCA AGGGCCTACC CCCCCTGGAG GCCATAAAGA CCGCAAAGCG CTTCATCTAC ATGGCCATCA GATACGGGGT GGCCAGGGGA AAGGGCCACT GGCCTGTCAA CCCAATGGCC TGGCTAGAGA TACCGGCGGA GAGGTGGAAG ACGTTGGAGG AGCTGAGGGA GGCTCTAGAG GCCGTGGAGA GAGAGGCCGA GGCTTTTGCA AAGGCCATAC CCGAGGTGCA GACAAACATA GGATACGCCA TAGACCCCCG CTACGCCACA ACGAGAGAAG ACGTCGCCGC AGTGCCCGGG AGGATAGTGA ACTACATGGG CCGCGCCAAG CCCTCCGGCC CGCCCGCCTT CGGCGCAAGC GACCACATAG CCAGGAAGAT ACTGGCGGCG CTGGCGAAAG ACCCCCAGGC CAGGTCGGCC ATGAACATAA GGCTAGACGC GGCGTACATA GAGAAGGCGA AGAGCCTAGG CATGACAATA GCCTACATAG ACAGGAGGAG GGAGCCGGAC GACGTCAAGA AGAGAGAGGG AGCCACCATG CAGTGGATCA TCGAAGAGGC CTATAGACAG ACAGGGGGAA AAACGCCAGA CCTAATAGTG GACTGGGGAG ACTGGGGCAA AGAGCCCATC ATAACCATAT TGGGGAAAAC CCCGAAGGAG GTGGTAGAGA AGGTCCTTCA ACTCATACGC TAA
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Protein sequence | MSWKVAMTIA GLDSGGGAGI HADIKTFAAM GVHGTTALTC VTAQNTYEVR EAQCLQPPLV RAQILAVWDD MGIDAGKTGM LGTREIIEEV AATVSKLGFP LVVDPVMIAK SGAPLISEDA VDTLKKRLLP VAKVVTPNRH EAEKLTGIKI TSVAEARRAA EVIHREFGTE VVVVKGGHLD APEAVDVVYI GGTFHELATP RLDSRATHGT GCSYSAAIAA GLAKGLPPLE AIKTAKRFIY MAIRYGVARG KGHWPVNPMA WLEIPAERWK TLEELREALE AVEREAEAFA KAIPEVQTNI GYAIDPRYAT TREDVAAVPG RIVNYMGRAK PSGPPAFGAS DHIARKILAA LAKDPQARSA MNIRLDAAYI EKAKSLGMTI AYIDRRREPD DVKKREGATM QWIIEEAYRQ TGGKTPDLIV DWGDWGKEPI ITILGKTPKE VVEKVLQLIR
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