| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1414 |
|---|
| Symbol | |
|---|
| ID | 4618306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1283927 |
|---|
| End bp | 1285177 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639784499 |
|---|
| Product | transposase, IS605 OrfB |
|---|
| Protein accession | YP_930915 |
|---|
| Protein GI | 119872908 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.259551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAG TCTACAGGAC GTTGAAGATC AGAATACCTT GGCGGTTGGT AGAGGAGCGG
CCGGACGTCC TAGACCTCGC CGTAAGGATG CACCTAGCGG TGGAGGAGTA CGTCAGAAGG
CTGTTGAAAG AGTTGACGGG GCAAGAGGAG CCGAAGCTAA CTACGGAGGA GTTGGACAGA
CTCCTCACGC CAGACAGGCG GGAGCTGGCT GTCAAGATAA TAGATGAGGT GTTTCCCAAG
TACGGGTTGG GGAGGTACTT CGTAAAGCAA GTTAAGATGT TCTGGCGCGA CGTGGCGTTC
TACCGGGCAA TTCCGCTCGA CGCCCAGCTT AGGGTTGAAA ACGAGAAAGA TATGGGTACG
GCGATCTTCG TCAACCTTAG AGACGGCGTC CTCAGAGTGC GAAGATTGCA AAAAACGTTT
GTCGTGTCGC TGAGGAGAAG CGACATCTCT TGGATAAGGG AGAGACTTCA AGAGGGCGCC
AGACTCAAGT TGGCATATTT GGGCATAGAA AAGCGGAAAG GTAAGAAGGA GCCGACCTAC
GGCAAGCTCT ACGTCGCCCT CGTCTTTGCC CGCGAGACAG CTCCTGTGGA GCCCAAGGCG
ATAGTCGCCG TTGACGTGAA TCGTCTCGAC CACGGCGTCA CGGTGGGTCT CCTCGTGGAC
GGGAAGTTGA GACAGACGTT GAGACTTATA GACGAAGACG CGGTGAGAGA ACTGAGGAGA
CTCCACGAGG AGATAAGCCG TCTCGACGAG CGAGCAGCGA GGGAGACGGA TCCCGCCAGA
AAGAGACGTC TTGAAGACAG AGCCCGCCAC CTTGCATCAA GGCGGTATAG AAAGATAAGC
GGCGTTGTCA AAGACGTCGT AAACGAGATA ATTAAGTTGG CGAGGGAGCA CAACGCCGCC
ATAGTCGTCG ACACGATGGA GGATGTGACG TATCTAGAGC GGAAGCAGAG CGGCGAGAGC
GGTGTGAAGA AGCACCTCTA CGACGGTCTC GGCCAACTAC GTCGCCGTTT GCAAGCGCTA
GCGCAGTGGT ACGGACTGCC GTACCTTGAG GAAAGACTGT ACTCAACCAT CTGCCCCCGT
TGTGGCGCGA AAATGGAGGA GAGAAAGCGC ATAATGCGTT GCCCCTCTTG CGGCTTCTCA
GACCACAGAG ACAACGTGCC ACTGATATGG GCAAAGAGAA GGTACTGGGA AATCCTCCAG
AAGACAAAAC AACCCACTTT TTCGGTACCC CTCATACTTT TAACCTCGTA A
|
|---|
| Protein sequence | MNQVYRTLKI RIPWRLVEER PDVLDLAVRM HLAVEEYVRR LLKELTGQEE PKLTTEELDR
LLTPDRRELA VKIIDEVFPK YGLGRYFVKQ VKMFWRDVAF YRAIPLDAQL RVENEKDMGT
AIFVNLRDGV LRVRRLQKTF VVSLRRSDIS WIRERLQEGA RLKLAYLGIE KRKGKKEPTY
GKLYVALVFA RETAPVEPKA IVAVDVNRLD HGVTVGLLVD GKLRQTLRLI DEDAVRELRR
LHEEISRLDE RAARETDPAR KRRLEDRARH LASRRYRKIS GVVKDVVNEI IKLAREHNAA
IVVDTMEDVT YLERKQSGES GVKKHLYDGL GQLRRRLQAL AQWYGLPYLE ERLYSTICPR
CGAKMEERKR IMRCPSCGFS DHRDNVPLIW AKRRYWEILQ KTKQPTFSVP LILLTS
|
|---|
| |