Gene Pisl_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1409 
Symbol 
ID4617013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1278804 
End bp1279949 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID639784495 
Producthypothetical protein 
Protein accessionYP_930911 
Protein GI119872904 
COG category[R] General function prediction only 
COG ID[COG4756] Predicted cation transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.417974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TACTCGCAGA ACCCATCCCC CGCCCTGAGG GGCGAGGCTT TCGGTTGTAT 
TTTTTAAAAG CTGTTGTTTT TGCGTGGGGT ATGGAGCTGG TTTTACAGGT GGTGTTTCTC
GTCTTGCTTG TGGCTCTTCC GCTGGCCTCT AGGCGGGTGG AGCATAACCT CGAGCTGTTT
TTCTTGGGGG TTGGCGTCGT GGCGGCGTCT GTTGGGGGGG TCTGGAGCCT GCACCTTCTT
GAGGAGGCTC TTCTCCACCC CGTGGCTGTC TACCAGCCGG GGGTCGGCTA CGTGCCGGTG
GGCATCACGC AGGTTGTTCT TCTGGCCGGG CTGGCCTTCT ACCTCTTGAG GCGGAGACTA
GCGGCTTGGG CCGGCGCTCT GGCTAGGCCT GGGGTGCTGG CTGCTTTGGT CCTGGCGCTG
GGGCTCTCTA GTAGCGTGGT GTCTGCGGTT GTGGCGGCGG CGGTGCTGGC GGAGCTTCTG
GCGTTTGCAA GGGCGCCGCA CAGCTACAAG GCGGTTGCGG CTGTGTCCGG CGCATACGCC
ATCGGCGCCG GCGCGGCTCT ACTGCCGCTA GGCGAGCCAC TGTCAGCCAT CGCAGTGGCT
AAGCTGAGAC AAGGCTTTTT CTACCTCGTA GATGTCCTCC TCGACGTGGT CCTCATCTTG
GTGATCTTCT TCGCCCTGTA CACCTACTTC GCGCTGGCGA GGCGGAGGGG CGCCGGGGCG
GAGGTAGAGC CGTATGAGCC GGAGCTTAGG GAGGTCTTCG CCAGGGCGGC TAGGGTGTAC
GTCTTCATCT TCGCCTTGAC CATACTGGGC GAGTTTTTCA AGCCGCTCGC CGCCGCCGTC
TCTGGACTCG GCAGAGAGGC CCTCTACCTC TTCGGCGCGG TCTCCGCCGT GGCAGACAAT
GCCACCCTCG TCGCAGCTCT GGTGGGCCCC GAGATGGCCC CAGAGGCGCT CCGGAGCTTC
CTAACGTCGC TCATCATCGC AGGCGGCTTC ACGGTGCCCG GCAACGTGCC CAACATCGTG
CTGGCGGGCG CCCTAAAGAT CGGCTTTAGG GAGTGGCTGA GGCTGGCCCT CCCCGTCGGC
ATCCCCGTGT TTACAGCCGC AGGGCTCTAC ACCCTGGCCC TCCTCCCACA CCCGCCGCTG
TTGTAG
 
Protein sequence
MKNILAEPIP RPEGRGFRLY FLKAVVFAWG MELVLQVVFL VLLVALPLAS RRVEHNLELF 
FLGVGVVAAS VGGVWSLHLL EEALLHPVAV YQPGVGYVPV GITQVVLLAG LAFYLLRRRL
AAWAGALARP GVLAALVLAL GLSSSVVSAV VAAAVLAELL AFARAPHSYK AVAAVSGAYA
IGAGAALLPL GEPLSAIAVA KLRQGFFYLV DVLLDVVLIL VIFFALYTYF ALARRRGAGA
EVEPYEPELR EVFARAARVY VFIFALTILG EFFKPLAAAV SGLGREALYL FGAVSAVADN
ATLVAALVGP EMAPEALRSF LTSLIIAGGF TVPGNVPNIV LAGALKIGFR EWLRLALPVG
IPVFTAAGLY TLALLPHPPL L