| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1397 |
|---|
| Symbol | |
|---|
| ID | 4617583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1265587 |
|---|
| End bp | 1267239 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639784484 |
|---|
| Product | peptidase S49 |
|---|
| Protein accession | YP_930900 |
|---|
| Protein GI | 119872893 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGA AAGCTCTTGC CGTTGGAATT GCACTAGCTC TTGCCATTGG CGTGGCGGCC
CTTTTCGCCG TGTTTTATAT ATGTCAGCCA AAGCCGGCGG CCCCCCAGCC TGTTAAGCCA
AAAATAGTCC TCGTCTCTGT GGATTTTGTC ATCGGCGGCC CCGAGACAGA TAAGTTAGTA
AAGGCGCTTA CAGAACTTTC ACAAAGAGAC GACGTGGCAG GCATAGTGCT TGTGATAAAC
TCGCCAGGCG GCACAGTCTC TGGGACAGAG ACACTCTACA CTACTCTCCT CGGTTTAAAC
AAGACGAAAT ACGCCGTGAT TGTCGGCCTC GGCGCCTCCG GCGCCTACTA CACCGCCGTG
GCGGCCGAGA GGATATACGC GGCGCCCTCC AGCTGGGTGG GTAGCATCGG CGTTGTGGCC
GTCATCTGGC CTGACCTATA CCTATACGAC GCAGCTGACT ATATATACAC CACAGGGCCG
TTGAAGTACT ACGGCGAAGA TCTCCACGGC TATTACGACG ACGTAGAGAA AATCAGACAA
AACTTTGTAG AGGCTGTGTT GAGGGGGAGG GCGGGAAGAA TCAAGGCGGA CCCGGCGGTT
TTAGAAACCG CAGGCCTCTT CACGGCGGAG GAGGCATTGA AGCTAGGCCT CGTGGATAAA
ATAGGAGGGG TCCTCGACGC CGCGAGAGAT ATGGCAGAGG AGCTGGGCCT TAGGAACTAC
TCCCTGGTCT ACCTAGGCGA TTTGATGAAC ATGACGGCGG CGGCCGCCTC GGCCTGGAGA
GTGCCTCTGT CCCAGCTCCT CAACGCCTCT CCCATCCCCA TATTCTATAT CTACCCCGGC
GTGCTTCAGA TCGACGTAAG AGCCGGCGTC CCCAGAAACG TTACTCTCCC CACGTCTCCG
CTGGGGAAGC CCTACGTGGT GTTGGACATG TCCCACGGCA ACATGGTGCC AAGGGGCTTT
ATCGAAGTGC TTAGGGCCGA GCTGGCCGTC CGGGGCTTCG CGCTGGTGGC GGCGGCGAGC
GAGAACCAAC TGACCTCTCT CCTGGCCAAC GCCACGGGGC TGGTCGTGGT TAACCCAACT
GCGCCGTTTT CAAGAGACGC CCTGGCGGCT GTGTTAAACG CGACGGCCAG GGGGGTGAGG
ACGGCCTACT TCTACGACAT GAGGGCAAGC GCCGTCGTTA TTTCAGGAGG GGCGGCCTAC
GTGGCGCCCT ACTCCGCCTA CGCCGTCTTC GACCCCCTTC CTATGTACTT CAACATGTCC
GGCCTAAGGG CAGTCTACAA CTTCACAGCA GGGGGCAGGA CCTACCTCCA GAACTGGCAG
TTCGTCTATG TGGAGCCCAG CGGAAACTGG ACCCTTTTGA GCGGCGTGAG GAGGCTGGTC
CTCTTCAGCC CCTCGGCGGT GGCGACCAAC GCCCCCCATA GGCTGACGGT GAGGGGCTAC
GTCTTCGGCT ACGGAGAGGG GAACTACACC GTGGCTGCGC AGGCCGGCAA CTTCCTCTTC
GTGGGGTCGG TCAGATCCTT CACGCCCTAC TTCATAACCC TGGGCGACAA CCGCAGGTTC
TTTAGCAACG TGGTGGCGTG GCTGACGGAG CCCAGACAGA TAAAGGCCGC CAAGGCGCCC
CACGCCTCCG GCGTCATCTA CGTAGGCGGC TGA
|
|---|
| Protein sequence | MAEKALAVGI ALALAIGVAA LFAVFYICQP KPAAPQPVKP KIVLVSVDFV IGGPETDKLV
KALTELSQRD DVAGIVLVIN SPGGTVSGTE TLYTTLLGLN KTKYAVIVGL GASGAYYTAV
AAERIYAAPS SWVGSIGVVA VIWPDLYLYD AADYIYTTGP LKYYGEDLHG YYDDVEKIRQ
NFVEAVLRGR AGRIKADPAV LETAGLFTAE EALKLGLVDK IGGVLDAARD MAEELGLRNY
SLVYLGDLMN MTAAAASAWR VPLSQLLNAS PIPIFYIYPG VLQIDVRAGV PRNVTLPTSP
LGKPYVVLDM SHGNMVPRGF IEVLRAELAV RGFALVAAAS ENQLTSLLAN ATGLVVVNPT
APFSRDALAA VLNATARGVR TAYFYDMRAS AVVISGGAAY VAPYSAYAVF DPLPMYFNMS
GLRAVYNFTA GGRTYLQNWQ FVYVEPSGNW TLLSGVRRLV LFSPSAVATN APHRLTVRGY
VFGYGEGNYT VAAQAGNFLF VGSVRSFTPY FITLGDNRRF FSNVVAWLTE PRQIKAAKAP
HASGVIYVGG
|
|---|
| |