Gene Pisl_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1390 
Symbol 
ID4617775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1259716 
End bp1261098 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content54% 
IMG OID639784477 
Producttransposase, IS605 OrfB 
Protein accessionYP_930893 
Protein GI119872886 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCCACA ACGTCGGGGC CGCTGTAGAC GCGGTTTGTC TTGTGAAACT TTTGGCCTGC 
CCCCATGCAT CTTCTATAAC TAACAGAGAT TTCAGCCCCA CCACATATAC ACACATGTAC
GCATACAGAA CGCTAAAGAT AGAAATCCCC TGGCGCCTCA TCGAGGAGCG TCCAGACGTC
CTAGACCTCG TCACGAGGAT GCACCTAGCG GCGGAGGAGT ACGCCAGAAG GCTGTTGAAG
GAGATTACGG GACAAGATGA ACCAAAGCTC GCGCCGGAGG AGCTAGACCG TCTCCTCACG
CCAGACAGGC GGGAGCTGGC GCGCCGGATA ATCGAGGAAG TGTTTCCCAA GTACGGGCTT
GGGAAGGCTT TTGTGGATTA CGCCAAGTTC CTCTGGCGTG ATACAGTGTT TCAACGGGCA
GTTCCGTTGA ACACCCAGTT AAGAACCGAA AACGAAAGAG ATACGAGTAA GGCGGTCTTT
GTCGACCTAA AGAGCGGTGT CGTCAGAGTG CGGAAGTTGG GCATACCGCC TTTTGTCGTA
AAATTGAAGA AGAGCGACAT CGCTTGGATA AGGGAGAGAC TACAGGAAGA CGCCAGACTC
AAGTTGGCAT ATTTGGGCGT TGACGTGAGG AGGGGCAAGG ATCCTACTTA CGGCGGCCTA
TACATCGCCC TGGTGTTCGC TAGGGAGGTC AAGCCGGTGG AGCCCAGGGC TATTGTCGTC
GTAGATGTCA ACCGGTTGGA CCACTACATA AAGGTTGGCC TCGTGGCCGA CGGTCGTGTC
GTGGAGCTAT TGAAGTTCCC CAAGAAAGAG CGGATACGGA AGCTTGAGAG GATACATGCT
CACATAAGCC AATTGGAGAA AGCCCTCGCA CGTGTAGACG AGGACAGAGA CCCGCGTAGA
GCGCTAGACC TTCAGAGACA GTTGTGGAAA CTTGAGACGA AACGCTACGG CATAATCCGC
GACGTCGTTA TAAACGCCGC CCGCGAGATC ATAAAGCTTG CGAGGGAGCA CCAAGCCGCG
ATCGTAGTGG ATACAATAGA GGACGACACC TACCGGGAGC TGAAGGAGTG CAACGGAAAC
GGCGTGAGGA AACACTTCCT AGACGGGCTT GGGCAGTTAA GGAGACGCTT GCAAGCGCTC
GCACAATGGT ACGGCCTTCC GTATGTGGAG GAGCGGCTAT ACAGTACGAT CTGTCCTAGA
TGCGGCGCTA AGATGGCGGA AGAGGGGAGA CGCGTAATGC ATTGCCCCGC CTGCGGCTTC
GGGGCACATA GAGACAACGT CCCCATGATA TGGGCAGAGA AGAAGTATCA AGAGCTGATA
GAGAAGACAA AACAACCCAC TTTTTCCTCC GCACCGGCGA CCGTCACATT TTTAACCTCG
TAA
 
Protein sequence
MFHNVGAAVD AVCLVKLLAC PHASSITNRD FSPTTYTHMY AYRTLKIEIP WRLIEERPDV 
LDLVTRMHLA AEEYARRLLK EITGQDEPKL APEELDRLLT PDRRELARRI IEEVFPKYGL
GKAFVDYAKF LWRDTVFQRA VPLNTQLRTE NERDTSKAVF VDLKSGVVRV RKLGIPPFVV
KLKKSDIAWI RERLQEDARL KLAYLGVDVR RGKDPTYGGL YIALVFAREV KPVEPRAIVV
VDVNRLDHYI KVGLVADGRV VELLKFPKKE RIRKLERIHA HISQLEKALA RVDEDRDPRR
ALDLQRQLWK LETKRYGIIR DVVINAAREI IKLAREHQAA IVVDTIEDDT YRELKECNGN
GVRKHFLDGL GQLRRRLQAL AQWYGLPYVE ERLYSTICPR CGAKMAEEGR RVMHCPACGF
GAHRDNVPMI WAEKKYQELI EKTKQPTFSS APATVTFLTS