Gene Pisl_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1379 
Symbol 
ID4618235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1251424 
End bp1251882 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID639784466 
ProductPaREP8 domain-containing protein 
Protein accessionYP_930883 
Protein GI119872876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.611746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCC CCAGCTACCT TTTGGAGATC CTTAGGGTGC ACGGGCTTGG CCCGCTTGCC 
GTGTTGCACG ACGCGGTAGC CCAGGGTCTA GATCCGCCGG AGCGCGTAGA GCTGTACCTA
AAGGCGTCTG AATACTTTTG GGAGGAGGGG CTGAGGCTTA TCAATGCCGG CGATCTTAGA
CAAGGCGGCG AGAAGATCTG GAACTCAGTA GTGCAACTAG TCAAGGCCGT GGCGGAGGCG
CGGCGCTGGC CGCACGATAC ACATAGGCTT GTCTGGGCCG CCGTGAGGAG GATCTCCCAG
GAGCTGGGAG ATCGTGAAGT TGTGAAGCTC TTCGCGCAGG TGGAGCAACT ACACGTGAAC
TTCTACGAGG GGCACTTGGA GAGGTGGGAC GTAGACGTCT TCGTCGAGGC GGCGAAGACG
CTTAGAGAGA AGCTAGGGGC AGCGCTGGGA GGCCGCTAG
 
Protein sequence
MEIPSYLLEI LRVHGLGPLA VLHDAVAQGL DPPERVELYL KASEYFWEEG LRLINAGDLR 
QGGEKIWNSV VQLVKAVAEA RRWPHDTHRL VWAAVRRISQ ELGDREVVKL FAQVEQLHVN
FYEGHLERWD VDVFVEAAKT LREKLGAALG GR