Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1377 |
Symbol | |
ID | 4617588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1250891 |
End bp | 1251157 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639784465 |
Product | HEPN domain-containing protein |
Protein accession | YP_930882 |
Protein GI | 119872875 |
COG category | [S] Function unknown |
COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.239997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCACG CAGAGCAGGC GCTACAGCTG TGTCTGGAGT ACAAGCTCTA CAGCCGCTTG GGGGATTTCC CCCCGAAGAA CGACCTTAAG ACTCTGGCTT CGGCCTTGTC AAGGTTTGAA TGCGTCGACG TCGACCCCCT CTTTCTCGAC TTATTGACGC TGGCCTACAC GGCGTCTAGA TACCTCCCAT TTACCTTTTC TCCGGAGGCC GCCGGGAGGG CCGTGGAGTA CGTGGAGAAG CTCTTGGGGG AGTTGGGATG TTTGTAG
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Protein sequence | MFHAEQALQL CLEYKLYSRL GDFPPKNDLK TLASALSRFE CVDVDPLFLD LLTLAYTASR YLPFTFSPEA AGRAVEYVEK LLGELGCL
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