Gene Pisl_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1337 
Symbol 
ID4616686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1212344 
End bp1213555 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content57% 
IMG OID639784426 
Producthypothetical protein 
Protein accessionYP_930843 
Protein GI119872836 
COG category[S] Function unknown 
COG ID[COG1602] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.984704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCAG AGCTCTGTAT AAAGTGCAGA GGGGGTAGAT ACCTCTGTGG CTTGTCTTAC 
TGCCCTCTTC TTGTAAGACA GCTAGCGGCG CCTTTTAGGA TAAAAATTTC GAGAGAGCTA
TCTGGCTCAA GCCCGCCGTC TGTCTTTGTT GGGAGAGTTG GATATCCAAA AGTTAGGATC
TACCCCTCCG CCCCGCCCGA GCTCGGGGAC ACCTCGCTAT ATGAAGACCC AAGGAGGTGG
CTTGAGATCC CTCTGGAAAA GTTCATCGCC ATGCGTCTCT CCCTATATCG GGGCGGCTTG
GAGATCCGCG TAGACAACGC GGCTGACCCT CCGAGGTCTC TTCAGGAGAT CCAGCTGATC
GCCCTCTCCG AGAGACCTGT AGATGTCGAT CTACGTTTTA GAAGAGAGCC GAGGGGGGTA
TATTTAAGTG AGTACGCCCC GCCAATGGGG CCCGCCGCGC CTCTCGCCGA ATTTAAAACA
GAGGGATCGC CGAAGTTGCC GAAGTCAGCC GAGAAGGCAT ACAGCGATTT CGACCTAGAC
GCCAGAGAGG CGGTTTTGAC GCTGTACAGG TCGGGGTTTG ACATGGGCTA CATATCTAGA
GCCCTCAGCG TCGGGGCCCT GGGAACCCGG CGGCGGAGGA GGCTCGTGCC GACGAGGTGG
GCCATCACGG CGGTGGACAA GATAGTGTCT GACCACCTAG TGGAGAAGAT CAAAGAGTTC
GACACGGTGG ACGGCTACTA CCTCTACCTG AGGAGAGCCC CCGGCAACCT TTTCCTCGTG
ATACTGGCCC CCTCGAGGTG GGCTTATGAA TGGGGAGAGG CCTTTGAGCC AGGCACCGTG
TGGAACCCCG GGCCTGGCCT CGCAGTTGAG ACAGATTACG AGCTGTATCG TGGCAGAGAC
GACTACCCGG AGATCGGCGG TTGTTACTAC GCAGCTAGGC TTGCTGTAGC TGAGGCGCTG
TACCGCATGA GGAGACAGGC GGCGGTGGTG GCGTGGAGAG AAGTATATAC AGGATTTACA
ACTCCCGTCG GCGTGTGGTG GGTAAGAGAA AACGTGCGGG AGGCCCTCCG TAGCGAGCCA
GCCCGTTTCG ACACGCTTGA AGACGCGCTC TACGCCGCAT CTACCCTCAT GAAGATACCG
ATAGAAAAGT GGCTCTCCGC CTCTAGACTA GTCCATATTT TAAGATCTAG GCTTTTTGGC
GAAAGCCAAT AG
 
Protein sequence
MKPELCIKCR GGRYLCGLSY CPLLVRQLAA PFRIKISREL SGSSPPSVFV GRVGYPKVRI 
YPSAPPELGD TSLYEDPRRW LEIPLEKFIA MRLSLYRGGL EIRVDNAADP PRSLQEIQLI
ALSERPVDVD LRFRREPRGV YLSEYAPPMG PAAPLAEFKT EGSPKLPKSA EKAYSDFDLD
AREAVLTLYR SGFDMGYISR ALSVGALGTR RRRRLVPTRW AITAVDKIVS DHLVEKIKEF
DTVDGYYLYL RRAPGNLFLV ILAPSRWAYE WGEAFEPGTV WNPGPGLAVE TDYELYRGRD
DYPEIGGCYY AARLAVAEAL YRMRRQAAVV AWREVYTGFT TPVGVWWVRE NVREALRSEP
ARFDTLEDAL YAASTLMKIP IEKWLSASRL VHILRSRLFG ESQ