Gene Pisl_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1320 
Symbol 
ID4616633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1194977 
End bp1196104 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content60% 
IMG OID639784409 
Producthypothetical protein 
Protein accessionYP_930826 
Protein GI119872819 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2407] L-fucose isomerase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACT TCTTGGCCTC GGCTGTACAC GGGGTCGACT ACGTCGCCGA GGTGGAGAGA 
TATGTCGCTA GATATGTCTC TCTCAAAAAT CCGGAGAGAC CTGAGGGGGA GAGGTTCCCC
GTTATAATCC ACGGCACCGG CGGGACAACA GCTCAAGCGC TAGAACTCGT GGAGAAGGCT
GGTGCACGTG GCGCAGTTCT CGTGGGCTTC GGCGAGTACA ACAGCTTCGC AAGTGCACTA
CACACCAAGG CCGAGCTGGA GGCCTCGGGC CGCACGGCCG TCGTCTACCA CTGCCCCTCC
TACGCTGAGT GCGGCCCAGT TTTGGCTAAG GCGGTTAGGG TCTCTGCCGC CGCCTCCTCT
CTCATTGGCG TAAAGGCCGT GTTGATTGGG TCGAAGACCC GCCAGGCCGA CATAGTGAGA
GAGAGGTTCG GATGGCACGT GGAAGTTGTG TCTCTGGCCG ACTTCGAATC GGCGGCGGCA
AACTCGGAGC CCGACGGCGA GGCTCTTTCG TTATTTAAAG ACGAGAGGGT GGCGAAGGTG
GCGGCTGCCC TCCGCAAGCT GGCATCTGGG GCTGACCTCA TCGCTATACA GTGCTTCCCC
TTCTTGATAA AGGCCAGATA CACCCCGTGT CCAGCTCTCG CATTGTTGAA CGCCAAGGGC
TCCACAGTGG CGTGCGAGGG AGACCTCTCG GCTGGCTTCG CCATGTTGTT GCTGAGGAGA
CTGGCCGGAG AGAGCAGCTG GATAGCCAAC GTTGTGGAGA GCCGCGGCGA GAGAGCCACC
TTCGCCCACT GCACGGTGTC GCTAGACCTC GTAGAGCGGT GGTGGACTAT GCCACACTTC
GAGTCGGGTC TGCCCTATGG AATCGCCGGG GAGCTGAGGA GAGGCGTCTA CACGACTGTG
TCTATCTCGC CGGGGTTTGA GAAAGCGGTT GTGGGCCGGG TATACGTCGA GCGAAGCGGC
AACTACCTAC AGAGCGCATG CCGCACTCAG GCCACGGTTA GGTTTGGGAG GCCCGTCCGC
CTGGAGGCGG AGGCGCCAGC AAACCACCAT GTCTTTGCGC CTGGCGATGT GGCCGCCGAG
GCTGTAGACG TCTTAAAGCT CCTCTCTATC TCAACCGTTA TATACTAA
 
Protein sequence
MAYFLASAVH GVDYVAEVER YVARYVSLKN PERPEGERFP VIIHGTGGTT AQALELVEKA 
GARGAVLVGF GEYNSFASAL HTKAELEASG RTAVVYHCPS YAECGPVLAK AVRVSAAASS
LIGVKAVLIG SKTRQADIVR ERFGWHVEVV SLADFESAAA NSEPDGEALS LFKDERVAKV
AAALRKLASG ADLIAIQCFP FLIKARYTPC PALALLNAKG STVACEGDLS AGFAMLLLRR
LAGESSWIAN VVESRGERAT FAHCTVSLDL VERWWTMPHF ESGLPYGIAG ELRRGVYTTV
SISPGFEKAV VGRVYVERSG NYLQSACRTQ ATVRFGRPVR LEAEAPANHH VFAPGDVAAE
AVDVLKLLSI STVIY