Gene Pisl_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1314 
Symbol 
ID4617446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1190625 
End bp1191320 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content46% 
IMG OID639784403 
Producthypothetical protein 
Protein accessionYP_930820 
Protein GI119872813 
COG category[R] General function prediction only 
COG ID[COG2522] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAG AGAGAGTGCT CTCAGCTATT AGGGCTGTCC TCGCACGGGA GTTAGTAGAG 
AGGGGCTTGG GCGTAAACGA AACTGCGAGA CTTCTTGGCT TGACGCCAGC CGCCGTTTCT
ATGTATCTGT CTGGAAAGAG GGGTGGAGAG CTTGTTAATG TATTGACTAG CGATGAGAGA
ATTATGTCGC TTATTAAAAG CCATGCCGAA ATGTTTGCCG ATGCGGCAAA ACGCGGGGCT
AGGGGGCCTA TCGATCTCAC CGAGCTTGCG AAAGTTGTTT CTAATATCCT TGCTCAAAAA
AGTCCAGAGG TAGAACTAGA GGAATTAATA CAGACGCGAA TTCGGCTTGA ACAAGAGACT
GCTACAAGAG CTATGGCTTA TTCGTACAAA GTACGTAATC CTCTTGTGAG AGCGTTGTTT
ATGCAGATTG CCACAGATAG CCTCCGCCAT GCAGAGATAT TAACGATGAT TCTAGACTAT
CTCTCGGGGA GGCTAAAGGC AGATGAATTA GGCATAACTG TGGAAGAGCT TGAGACGCTG
GCGCAAGAGG AGTCTTCGAT GAGAGAAAGT ATCGCCGACC TTTACAAATT GGGAGATCCC
GTACTAAGGG CTTTAATTCT CTCTATTGAG TTAGATGAGC AAAAACACTA TCAGCTGGTA
AAAACTCTAC AGTTGACTCT ACGTAGGTCT AGTTGA
 
Protein sequence
MSLERVLSAI RAVLARELVE RGLGVNETAR LLGLTPAAVS MYLSGKRGGE LVNVLTSDER 
IMSLIKSHAE MFADAAKRGA RGPIDLTELA KVVSNILAQK SPEVELEELI QTRIRLEQET
ATRAMAYSYK VRNPLVRALF MQIATDSLRH AEILTMILDY LSGRLKADEL GITVEELETL
AQEESSMRES IADLYKLGDP VLRALILSIE LDEQKHYQLV KTLQLTLRRS S