Gene Pisl_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1313 
Symbol 
ID4616532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1189425 
End bp1190642 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content47% 
IMG OID639784402 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 
Protein accessionYP_930819 
Protein GI119872812 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGAAG TAGAGGTAAT AAGGGGGACC TACAGCAATT TACTACACAA CCAAAAGATA 
GCTCTAGTAG TATCCTCAGG AGTTTCGCTT TATAAATCTA TAGACACAGC ACGTCTATTA
ATTAGACATG GGGCCGACGT CTATGTCTTT ATGACGCCGC AGGCAGCACG ATTAATTTCG
CCACATCTCT TCTGGTGGGC CACTGGACAC AAGCCTGTTG TTAAACTCAC AGGCGCCACA
GAACATATAG AAATATGTGG AAGAGTAGAT GTGGTAGTTG TTGCGCCAGC TACTGCAAAT
ACTCTTGTCA AAATGTCTTT AGGCATAGCC GATAACGCTG CTTTGACATG TGTCCTCGCG
GCGTCTAAAG CCAAGAAGGT GGTTGTCCCA GCCATGAATT TAGCGATGTG GAATACGCCC
CAAGTACAAG AAGCTATAGA GAGACTTGGC AAACACACCA TAGTTGTCCC GCCGCTTTTT
GAAGAAGGTA AGGCGAAATA TCCGCCGCCT GAGGAAGTAG TTGAATATGT AATAGATGCC
ACTGCGCCGA GAGATTACGA AGGCATCCGC GTTTTAGTAA CAGCAGGCCC CACATACGAG
CATATAGACG ACGTAAAATA TATCACAACG CCTAGTAGTG GCCTCACGGG GTATTACTTT
GCTAGGGAAG CCGCCGCGAG AGGCGCAAAA GTGACGTTGG TGACAGGCCC CACAGACCTC
AAGCCTCCTC CAGGCGTAGA CCCCATAAAA GTAACGTCTG TGCTTGAGAT GTATCAAGCA
GTTGTAGAGA GAGCAGAAAG TCATGACGTA TTTATCTTCG CAGCGGCCCC CCTAGATTTC
TATGTTGAGA ATAAAATAGG CGGGAAAATC GATAGCTCTC TATCACAATA CGTTGTTGTA
TTACGCCAAG CGCCAAAGAT AGCCCAAGAC GTTAAAAAAT ACAACCCACG CGCCTTTGTA
ATAGGCTTTA AGGCAGAACA TGGCGTTAGA GAAGAAGAAT TAATCAAAAG GGCGAGACAA
AGGATGGAGA CAGGGGGTTG GGATATCGCC TTGGCACATG ATGTATCTAA GATGGGGTTT
AGAACGCTAA AAGACGAGTA CCTCCTCCTG ACGCAAGACG GGATAGAGAA GATAGGGCCG
GCTCACAAGC GGGAGTTGGC AAGGGCCATA TTGACTATTG CATTGGATAA ACTTCGAAAA
TCAACTAGAC CTACGTAG
 
Protein sequence
MYEVEVIRGT YSNLLHNQKI ALVVSSGVSL YKSIDTARLL IRHGADVYVF MTPQAARLIS 
PHLFWWATGH KPVVKLTGAT EHIEICGRVD VVVVAPATAN TLVKMSLGIA DNAALTCVLA
ASKAKKVVVP AMNLAMWNTP QVQEAIERLG KHTIVVPPLF EEGKAKYPPP EEVVEYVIDA
TAPRDYEGIR VLVTAGPTYE HIDDVKYITT PSSGLTGYYF AREAAARGAK VTLVTGPTDL
KPPPGVDPIK VTSVLEMYQA VVERAESHDV FIFAAAPLDF YVENKIGGKI DSSLSQYVVV
LRQAPKIAQD VKKYNPRAFV IGFKAEHGVR EEELIKRARQ RMETGGWDIA LAHDVSKMGF
RTLKDEYLLL TQDGIEKIGP AHKRELARAI LTIALDKLRK STRPT