| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1306 |
|---|
| Symbol | rps5p |
|---|
| ID | 4618034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1183062 |
|---|
| End bp | 1183670 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639784395 |
|---|
| Product | 30S ribosomal protein S5P |
|---|
| Protein accession | YP_930812 |
|---|
| Protein GI | 119872805 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.244204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCG TCGATTTAAG TCTTTGGGAA CCTCGTACAG AGTTGGGGAG GTTAGTAAAA
GAGGGGAAGA TAAGGACGAT AGATGAGATA TTTGCAAATA ACTACATTAT AAAAGAGCCC
GAAATTGTAG ACATACTACT GCCAGGTTTA AAACAGGAGA TTTTGAACAT AAATGTAGTT
CAGAGACAGA CGCATGCCGG CGAGCGTAGT CAGTTTCAAG TTGTTGTCGC AGTCGGAAAT
GAAGATGGAT ACGTTGGCGT CGGCATTGGA AAGGCGAAAC AAGTGAGACA AGCCATAGAG
AAGGCTGTTA GAGAAGCTAA GCTTAATTTA ACGCCTGTGA GAAGGGGGTG TGGTTCTTGG
AAATGTTCAT GTGACGAGCC GCACAGCGTG CCCTTTGTAG TAAGGGGAAA GTCCGGCTCT
GTGGAGGTTA CTTTAATCCC AGCGCCTAAA GGCGTTGGGC TGGTGGCTGG AGATGTTGCA
AAAGTCGTGC TTAGGCTTGC TGGGATTAAA GACGTTTGGA CACAAACACG GGGAGACACT
AGGACAACTC TAAACTTCGC CATGGCCGTT TACAACGCGT TAAGAAACAC CTATTACTTC
AAGATATGA
|
|---|
| Protein sequence | MSVVDLSLWE PRTELGRLVK EGKIRTIDEI FANNYIIKEP EIVDILLPGL KQEILNINVV
QRQTHAGERS QFQVVVAVGN EDGYVGVGIG KAKQVRQAIE KAVREAKLNL TPVRRGCGSW
KCSCDEPHSV PFVVRGKSGS VEVTLIPAPK GVGLVAGDVA KVVLRLAGIK DVWTQTRGDT
RTTLNFAMAV YNALRNTYYF KI
|
|---|
| |